Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq755 165 8e-36 seq210 86.0 6e-12 >seq755 Length=318311 Score = 165 bits (182), Expect = 8e-36 Identities = 939/1480 (63%), Gaps = 58/1480 (4%) Strand=Plus/Plus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| | ||||||||||| | ||| || | | | || | ||||| ||| | | | Sbjct 109877 TTGACGATCTGAAACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCC 109936 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || | ||||| || || || | || ||||| |||| || || ||||| |||| | Sbjct 109937 TCGATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGC 109996 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAA-AGTTTGCCAGTCCCA 147071 | || || | || |||| ||| || ||||||| || || ||||||||| Sbjct 109997 AGCAGGCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCCTTCAGCAGCTT-CCAGTCCCA 110055 Query 147072 CA--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129 || ||| | |||||| | ||||||||||||||| || | || ||| | || Sbjct 110056 CAGGTCG--GTCGGCGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACTGGG 110113 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCG---TCGCGCTGCGCCAATTCACAGCTTGCCTCG 147186 ||| || |||| |||| ||| ||| ||||| || || ||||| ||||| Sbjct 110114 GAGCCCTCGTACGTCTCGTAGGGGCCGAACTCG-GCTGC--CAGCTCGCAGCTCGCCTCC 110170 Query 147187 AGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTC 147246 || || | ||||| ||||| ||| ||| || |||| || | || || ||| Sbjct 110171 AGAGCAGCGTAGTAGATGGTCTCGAAGATGTGGATGTTGAGCAGCTGAGCCTCGGGGCTT 110230 Query 147247 TCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATA 147306 || | || ||||| || | ||||| || || ||||| || | |||| ||||| Sbjct 110231 TCAAACGGGTGACGCATGAGGATGAAGGCGTCTGCTAAACCTTGCACTCCGATTCCGATC 110290 Query 147307 GGTCGATGCTTTTCGTTG-----CTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGAT 147361 || | || | |||| || ||||| || | |||| |||| |||| | Sbjct 110291 GGCCTGTGGCGCTTGTTGGAATTCTCAGCTTCAGGCAC----TGGG-TAGTAGTTGATGT 110345 Query 147362 CAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAAT 147421 | ||||||||||| ||||| || | ||||| || | ||||| | || | Sbjct 110346 CGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTGACATACGCCAGTTTTTTAAAGT 110405 Query 147422 CATAAGTCCCGTCTTCGAC-ACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAG 147480 || |||||| || | |||||| || ||| | |||||| || |||||||| ||| Sbjct 110406 CAAAAGTCCGCTCCGGGGTGACGTAC--AT--GTTGAGGGCGATGGAGGCCAGATTACAG 110461 Query 147481 ACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTT 147540 || || ||| || | | |||| | |||||||| | ||| ||||||||||| || Sbjct 110462 ACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAGAGGTTGCTGCACTTG 110521 Query 147541 ATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTAC 147600 ||| |||| ||| ||||| ||||| |||| ||||| ||||||||| | ||||||||| Sbjct 110522 ATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTAC 110581 Query 147601 GGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTA-TGCAGGTCCTGCGC--TC-G 147656 || || ||||| |||| || | ||| | || ||| | ||| || || Sbjct 110582 GGCGTACCCGTCTCCGTCTGCGACTCGATGAT-GGCGTACCACAGCTGCTGAGCCTTCAC 110640 Query 147657 CACCCGCT--GCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCG 147714 ||| |||| ||| | || || || || |||| ||| | | ||||||||| Sbjct 110641 CACACGCTTGGCC-----CTCCCTTCCTTCTCATACCTGGTGTAGAGCTCCTCAAACTCC 110695 Query 147715 TCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCG 147774 || || |||| ||| | || || ||||| | ||||||||||| ||||| | | Sbjct 110696 TCCCCCCAGCACTCGTCCAGTCCAGGACAGGCGTTGGGACACATCAGAGACCAGTCCTGG 110755 Query 147775 TCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGC-- 147832 | | || | ||| |||||||| || | ||| || ||||| | ||| || | Sbjct 110756 TTGCTCTCCACCCTCTTCATGAACAGATCGGGGATCCAAAGGGCGTAGAAAAGGTCTCTG 110815 Query 147833 GCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCGG 147892 || || ||| ||||| || |||| |||| | || | | | | ||| Sbjct 110816 GCCCTCTGC--TCCTCCTTTCCTGTGTTCTTCTTCAGCTCGAGGAAGTCGAACACGTCAA 110873 Query 147893 CGTGCCAGGGTTCAATGTAGACGGCCAGCGCACC---TTTACGCTTTCCGCCCTGGTCGA 147949 |||||| || || | ||| | ||| | || || | | || || |||||||||| Sbjct 110874 AGTGCCACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCTTGTTGCCACCCTGGTCGA 110933 Query 147950 CATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGT 148009 | | ||| || ||||||| | || | || |||||| | || ||| | | |||| | Sbjct 110934 CGTAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCCGTTGGAGTTGCCAT 110993 Query 148010 TGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCA-----AT 148064 |||| | ||| | ||| || || || | |||| | | ||||| || Sbjct 110994 TGGTACCAGAGATGTAGCTTCCTGTGGATC-----TGATGCAGCTGACCGCCACACCGAT 111048 Query 148065 GCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGA 148123 ||| || |||| |||| || ||| || || | || || |||||||| |||| Sbjct 111049 GCCTCCAGCCG-ACTTGGAGATGAGGGCACACTGCTTCAGAGTGTCATAGATGCCTTCGA 111107 Query 148124 TGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCG 148183 ||||||||| ||| | | | |||| || || ||| || || | ||||| | Sbjct 111108 TGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTTCCAG 111167 Query 148184 CCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCT 148243 | ||| || || || ||||| || ||| | || | || || | || |||| Sbjct 111168 CGTTGAAGAGAGTCGGGGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTCT 111227 Query 148244 CAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCT 148303 | || || | |||||||| ||| || || | | || | |||||||||||||| Sbjct 111228 CGATGGCTGCATCGATGTCCGTTTTGTGGATTCCTACGGACACCCTCATGAGCATGTGCT 111287 Query 148304 GTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATA 148343 | || || ||||| |||| ||||||||| | ||||| Sbjct 111288 GCGGACGCTCGGCCACTTTGCCGTTGATCTTCAACAGATA 111327 >seq210 Length=679747 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| || | ||| | | | |||||||| || ||||||||||| | ||| || | Sbjct 555747 CGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCA 555688 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| ||||| ||||| | | | || || | ||| || || ||||| || || ||||| Sbjct 555687 TCTTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTG 555628 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || ||| ||||| | || | || ||| | |||||||| || | || | Sbjct 555627 TCCTGGATCTTTGCTTTCACATTCTCTATGGTGTCGCTGGGCTCCACCTCCAGGGTGATG 555568 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||||||||| || || | || |||||||| Sbjct 555567 GTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 555533 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||| || | | | |||||||| || ||||||||||| | || || | Sbjct 555975 CGCAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCA 555916 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| ||||| ||||||| | |||| || | ||| || || ||||| || || ||||| Sbjct 555915 TCTTCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTG 555856 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||||| ||| | | || | ||| ||| | |||||||| || | || | Sbjct 555855 TCCTGGATTTTAGCTTTGACGTTCTCGATAGTGTCGCTGGGCTCCACCTCCAGTGTGATG 555796 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 || || || || || || || | || ||||||||| || Sbjct 555795 GTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATGCCT 555757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476576538450480