Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1310 163 3e-35 >seq1310 Length=240470 Score = 163 bits (180), Expect = 3e-35 Identities = 144/180 (80%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || | ||| || | |||||||||||| |||| |||||||| |||||||| Sbjct 118503 CTTGAGTCCTGTAATGTGAGCGATCATGTAGGTGAGGAGCGCATAGCTGGCGATGTTGAA 118444 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || ||||| ||||| || ||||| | |||||||||||| ||||| ||||| ||||| Sbjct 118443 CGGCACTCCCAGACCCATATCACCCGAGCGCTGGTACAGCTGACACGACAGCTCACCGTC 118384 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGC 147161 |||||| |||||||| || |||||| |||||||| |||||| ||||||||| || Sbjct 118383 ACACACGTAGAACTGGCAGAGAGCGTGGCAGGGCGGCAGAGCCATGAGGGGCAGGTCTGC 118324 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/140 (74%), Gaps = 6/140 (4%) Strand=Plus/Minus Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 || ||||||||||||||||||||||||||||| |||||||||||||| || || | Sbjct 116818 GCACCAAAGTGCCTCCACTGGAAGCCGTACACAGGCCCCAGGTCGCCCTCCTCTCGCTCT 116759 Query 147343 GAGAAGCCCGCCCGCTTG---AGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACT 147399 | ||| |||| | ||| | || || |||| |||| ||| |||||||| |||| Sbjct 116758 GTGAA-CCCG--AGGTTGTCCAAGAAGTCCCGGGAACCGTTGGCATCCCAGATTTTCACT 116702 Query 147400 CCCTTGGCGGAGAGCTCCTT 147419 || || | || || ||||| Sbjct 116701 CCTTTCTCTGACAGTTCCTT 116682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583445565835200