Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq210 140 3e-28
seq1721 113 4e-20
seq1 86.0 6e-12
>seq210
Length=679747
Score = 140 bits (154), Expect = 3e-28
Identities = 146/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||| || | | ||| || | || |||||||||||||| |||||
Sbjct 555724 CTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCTTCCAGCTGCTTACCAGCAAA 555665
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| || ||||||||| | ||| | | ||| |||||| ||||||| |||| | |
Sbjct 555664 TATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTGTCCTGGATCTTTGCTTTCACATT 555605
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | |||||||||| ||||| || ||||| ||||| || |||||
Sbjct 555604 CTCTATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCAC 555545
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 555544 AAAGATCTGCAT 555533
Score = 107 bits (118), Expect = 2e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||| || | | || || | || |||||||||||||| |||||
Sbjct 555952 CTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAA 555893
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| || ||||||||| | ||| | | ||| |||||| ||| ||| |||| ||
Sbjct 555892 GATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTGTCCTGGAT-TTTAGCTTTGACGT 555834
Query 35665 T-GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
| | | |||||||| | |||||||||| ||||| || || || || | || ||||
Sbjct 555833 TCTCGATAGTGTCGCTGGGCTCCACCTCCAGTGTGATGGTCTTGCCGGTGAGGGTCTTCA 555774
Query 35724 CAAATATCTGCAT 35736
|||| ||||||||
Sbjct 555773 CAAAGATCTGCAT 555761
>seq1721
Length=144067
Score = 113 bits (124), Expect = 4e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| | ||| || | || ||||||||||| || || ||
Sbjct 118119 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAA 118060
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| ||||||||| | |||| || ||||||||| ||| || ||| | | |
Sbjct 118059 GATCAACCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTGACATT 118000
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | || ||||| | ||||| || || || || | ||||||||
Sbjct 117999 CTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTCAC 117940
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 117939 AAAGATCTGCAT 117928
Score = 98.7 bits (108), Expect = 9e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | | ||| || | || ||||||||||| || || ||
Sbjct 118575 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAA 118516
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| ||||||||| | |||| | |||||||| |||||| ||| | | |
Sbjct 118515 GATCAACCTCTGCTGGTCAGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 118456
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | || ||||||| ||||| || || || || | || || ||
Sbjct 118455 CTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTTCCAGTGAGGGTCTTGAC 118396
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 118395 GAAGATCTGCAT 118384
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| ||||| |||||||| || | | ||| || | || ||||||||||| || |||||
Sbjct 118346 TCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAG 118287
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|| | || ||||||||| | |||| || ||||||||| |||||| ||| | | |
Sbjct 118286 ATAAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTC 118227
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || ||||| | ||||| || || || || | || || ||
Sbjct 118226 TCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACG 118167
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 118166 AAGATCTGCAT 118156
>seq1
Length=3345205
Score = 86.0 bits (94), Expect = 6e-12
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 44303 CGTAGGATGTATGTGGTCCATTTGCGGTGTCCACGACAGGGCGTGGCGAGAGCTACCCAT 44362
|| ||| || |||||||| |||||||| |||||||| ||| ||| ||||| || ||
Sbjct 1831938 CGCAGGTTGCATGTGGTCTATTTGCGGCATCCACGACCGGGGATGGGGAGAGAGGCCTAT 1831879
Query 44363 CTACGGCAAAGTGCGCTACATGAACTACAACGGTTGCGTCAGAAAGTTTGATGTA 44417
| ||| ||| | ||||||||||||||||| || ||| | | |||||| | |||
Sbjct 1831878 TTTCGGAAAAATCCGCTACATGAACTACAAAGGCTGCCTTCGGAAGTTTAACGTA 1831824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450760816035440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |