Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq210 140 3e-28 seq1721 113 4e-20 seq1 86.0 6e-12 >seq210 Length=679747 Score = 140 bits (154), Expect = 3e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| || | | ||| || | || |||||||||||||| ||||| Sbjct 555724 CTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCTTCCAGCTGCTTACCAGCAAA 555665 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| || ||||||||| | ||| | | ||| |||||| ||||||| |||| | | Sbjct 555664 TATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTGTCCTGGATCTTTGCTTTCACATT 555605 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | |||||||||| ||||| || ||||| ||||| || ||||| Sbjct 555604 CTCTATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCAC 555545 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 555544 AAAGATCTGCAT 555533 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| || | | || || | || |||||||||||||| ||||| Sbjct 555952 CTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAA 555893 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | ||| | | ||| |||||| ||| ||| |||| || Sbjct 555892 GATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTGTCCTGGAT-TTTAGCTTTGACGT 555834 Query 35665 T-GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | | |||||||| | |||||||||| ||||| || || || || | || |||| Sbjct 555833 TCTCGATAGTGTCGCTGGGCTCCACCTCCAGTGTGATGGTCTTGCCGGTGAGGGTCTTCA 555774 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 555773 CAAAGATCTGCAT 555761 >seq1721 Length=144067 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || | || ||||||||||| || || || Sbjct 118119 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAA 118060 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| ||||||||| | |||| || ||||||||| ||| || ||| | | | Sbjct 118059 GATCAACCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTGACATT 118000 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || ||||| | ||||| || || || || | |||||||| Sbjct 117999 CTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTCAC 117940 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 117939 AAAGATCTGCAT 117928 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || ||||||||||| || || || Sbjct 118575 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAA 118516 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| ||||||||| | |||| | |||||||| |||||| ||| | | | Sbjct 118515 GATCAACCTCTGCTGGTCAGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 118456 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||||| ||||| || || || || | || || || Sbjct 118455 CTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTTCCAGTGAGGGTCTTGAC 118396 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 118395 GAAGATCTGCAT 118384 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||| |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 118346 TCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAG 118287 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | || ||||||||| | |||| || ||||||||| |||||| ||| | | | Sbjct 118286 ATAAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTC 118227 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | ||||| || || || || | || || || Sbjct 118226 TCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACG 118167 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 118166 AAGATCTGCAT 118156 >seq1 Length=3345205 Score = 86.0 bits (94), Expect = 6e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 44303 CGTAGGATGTATGTGGTCCATTTGCGGTGTCCACGACAGGGCGTGGCGAGAGCTACCCAT 44362 || ||| || |||||||| |||||||| |||||||| ||| ||| ||||| || || Sbjct 1831938 CGCAGGTTGCATGTGGTCTATTTGCGGCATCCACGACCGGGGATGGGGAGAGAGGCCTAT 1831879 Query 44363 CTACGGCAAAGTGCGCTACATGAACTACAACGGTTGCGTCAGAAAGTTTGATGTA 44417 | ||| ||| | ||||||||||||||||| || ||| | | |||||| | ||| Sbjct 1831878 TTTCGGAAAAATCCGCTACATGAACTACAAAGGCTGCCTTCGGAAGTTTAACGTA 1831824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450760816035440