Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq1056 96.9 5e-15 seq570 93.3 6e-14 >seq1056 Length=264320 Score = 96.9 bits (106), Expect = 5e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 214082 CGTTTCGCACTGGGTAACGAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATT 214141 || ||||| | || ||||| || || || || |||||| | ||| ||||||||| Sbjct 41009 CGCTTCGCTGTCGGCCACGAGGCCTTCGGCCTGGTCCCCGGTCTGATGATGTACGCCACC 41068 Query 214142 ATCTGGCTGAGAGAGCACAACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGG 214201 |||||||| | || |||||| |||| |||||||||||||| | | ||||| || ||| Sbjct 41069 ATCTGGCTCCGCGAACACAACCGGGTGTGCGACGTGCTGAAGGAGGTCCACCCCGACTGG 41128 Query 214202 AACGACGAACAGCTGTTCCAGATCAC 214227 |||||||| ||| || |||| ||| Sbjct 41129 GACGACGAAAGGCTCTTTCAGACCAC 41154 >seq570 Length=446048 Score = 93.3 bits (102), Expect = 6e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 214094 GGTAACGAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGA 214153 ||| | ||| |||| || ||| |||| || ||| ||||||||| || |||||||| Sbjct 86873 GGTCAGGAGGTGTTCGGCCTCCTGCCGGGCCTCACCATGTACGCCACCATATGGCTGAGG 86932 Query 214154 GAGCACAACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAG 214213 ||||||||||| || || ||||| ||||| ||||| || ||| |||| || ||| Sbjct 86933 GAGCACAACAGAGTGTGTGACGTCCTGAAGGCTGAGCATCCCAGCTGGGACGATGAGCAG 86992 Query 214214 CTGTTCCAGATCAC 214227 |||||||||| ||| Sbjct 86993 CTGTTCCAGACCAC 87006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723288195040320