Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq755 452 5e-122 seq35 102 1e-16 seq1980 96.9 5e-15 >seq755 Length=318311 Score = 452 bits (500), Expect = 5e-122 Identities = 1275/1944 (66%), Gaps = 23/1944 (1%) Strand=Plus/Plus Query 68653 TTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTA 68712 ||||| ||||| || ||||||| ||||| || | || | || || || || || Sbjct 109820 TTCTTCATCTCCTCGTTCCACAGCCCCCTCTCTGTCAGGTCTTTGAGCAGGTGGGGGTTG 109879 Query 68713 ACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 68772 || || ||||| || || || | || || || ||||| || || ||||| || | || Sbjct 109880 ACGATCTGAAACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCG 109939 Query 68773 ACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAAT 68832 | || || || || ||||| || || || || || || || ||||| || |||| || Sbjct 109940 ATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGCAGC 109999 Query 68833 AAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGA 68892 | || || || | || | | | ||| || || || || | ||||| ||||| || Sbjct 110000 AGGCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGG 110059 Query 68893 TCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCA 68952 || | || | ||| | ||||| || || || || || || | || || Sbjct 110060 TCGGTCGGCGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACTGGGGAGCCC 110119 Query 68953 TTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCG 69012 | || || || || || || || | || || || || || ||||| | ||| || Sbjct 110120 TCGTACGTCTCGTAGGGGCCGAACTCGGCTGCCAGCTCGCAGCTCGCCTCCAGAGCAGCG 110179 Query 69013 TAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGA 69072 || || || || ||||| || | | ||||| || || || | || || || || Sbjct 110180 TAGTAGATGGTCTCGAAGATGTGGATGTTGAGCAGCTGAGCCTCGGGGCTTTCAAACGGG 110239 Query 69073 TAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGT 69132 | | | | || || || || ||||| || || || || || || ||||| || || || Sbjct 110240 TGACGCATGAGGATGAAGGCGTCTGCTAAACCTTGCACTCCGATTCCGATCGGCCTGTGG 110299 Query 69133 CTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTA 69192 | ||| || ||| | |||||||| || | || || || || || || ||||| || || Sbjct 110300 CGCTTGTTGGAATTCTCAGCTTCAGGCACTGGGTAGTAGTTGATGTCGATAATCTTGTTC 110359 Query 69193 AGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCA-TC 69251 || ||| ||| | |||||| || | | ||||| ||| ||||| |||| || Sbjct 110360 AGGTTTTTGACGATTACTTTGGTGACATACGCCAGTTTTTTAAAGTCAAAA-GTCCGCTC 110418 Query 69252 TA---TAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGA 69308 | || |||| || || || | || || |||||||| || |||||||| | | Sbjct 110419 CGGGGTGACGTACATGTTGAGGGCGATGGAGGCCAGATTACAGACCGCTACCTCGTCATG 110478 Query 69309 ATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTG 69368 | | |||| | || ||||| || || || || || ||||| || |||||||| || Sbjct 110479 GCTGGTGTATTCGACGATTTCTGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTG 110538 Query 69369 CTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAAT 69428 ||| || ||||| |||| |||||||| ||||| || || |||| ||||| || || | Sbjct 110539 CTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCCGTCTCCGT 110598 Query 69429 CTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTT 69488 ||| || ||||| || | | ||| | | ||| || | || |||| | | Sbjct 110599 CTGCGACTCGATGATGGCGTACCACAGCTGCTGAGCCTTCACCACACGCTTGGCCCTCCC 110658 Query 69489 CTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548 || || ||||| || || ||| || || || || ||||| || |||| ||| Sbjct 110659 TTCCTTCTCATACCTGGTGTAGAGCTCCTCAAACTCCTCCCCCCAGCACTCGTCCAGTCC 110718 Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608 |||||| | || |||||||||| ||||| | | | || || | ||||| || Sbjct 110719 AGGACAGGCGTTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAA 110778 Query 69609 TAGATCGGGAATCCAAAGAGC-TATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTG 69667 |||||||| |||||||| || || ||| || ||||||| || | || || ||||||| Sbjct 110779 CAGATCGGGGATCCAAAGGGCGTAGAAA-AGGTCTCTGGCCCTCTGCTCCTCCTTTCCTG 110837 Query 69668 TAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCG 69727 | || || || || ||||| || || | | ||| | ||||| || || | || || | Sbjct 110838 TGTTCTTCTTCAGCTCGAGGAAGTCGAACACGTCAAAGTGCCACGGCTCCAAGTACATGG 110897 Query 69728 CCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGA 69787 | | | |||| |||| || || || ||||| || | ||| | || ||||| || || | Sbjct 110898 CGAAGGCTCCGGGTCTCTTGTTGCCACCCTGGTCGACGTAACGCGCCGTGTTGTTGTAAA 110957 Query 69788 CTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTC 69847 |||||||||| || | | || || || || ||||| || ||||| || || |||||| Sbjct 110958 CTCTCAGCATGGGGACGAGCCCGTTGGAGTTGCCATTGGTACCAGAGATGTAGCTTCCTG 111017 Query 69848 TTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCAC 69907 | | | || || | | | ||| || ||||| ||| || ||||| || |||| Sbjct 111018 TGGATCTGATGCAGCTGACCGCCACACCGATGCCTCCAGCCGACTTGGAGATGAGGGCAC 111077 Query 69908 AACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAAC 69967 | | |||| |||||||| || || || ||||| || ||| ||||| || || || | Sbjct 111078 ACTGCTTCAGAGTGTCATAGATGCCTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGC 111137 Query 69968 AGCTAGACATTTGATG-ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTG 70026 |||| |||| || | ||| | ||||| || || || | || || || ||||| ||| Sbjct 111138 AGCTGGACAGCTGTGGCCTGT-TGGTTCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTG 111196 Query 70027 AACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGA 70086 ||||| || || || ||||| ||||| || || || |||| || || ||| | || Sbjct 111197 AACCACTTCTCCGACAGCAGGTTGTAGGTCTCGATGGCTGCATCGATGTCCGTTTTGTGG 111256 Query 70087 ATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATT 70146 ||||||| | || | ||| | ||| ||||| || || || || ||| || || Sbjct 111257 ATTCCTACGGACACCCTCATGAGCATGTGCTGCGGACGCTCGGCCACTTTGCCGTTGATC 111316 Query 70147 TTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTT 70206 |||||||| || || |||||||| || || || || ||||||| || || ||||| Sbjct 111317 TTCAACAGATAGGAGCGCTCCAGAGTCTTGAAGCCGAAGAAGTTGTAGGAGAAATCTCTG 111376 Query 70207 TCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATC---CATAACA 70263 ||| | || || | || || || || || | | ||| || || | | | Sbjct 111377 TCGAAGATTATGGCCGAGTTGAGGCGGTCTTTGTTCTCAAGAACAATGTCGAGCGTCTCC 111436 Query 70264 GTAGGTGAGATAATCGGAGA---TCGTTTACCATTTTTAGGATTAACATAGTTGAATAAA 70320 | |||||| || || || ||||| || || || || |||||| | | Sbjct 111437 TT---TGAGATCATGGGGGAGTGGCGTTT---GTTCAAGGGGTTGACGTAGTTGTACAGG 111490 Query 70321 TCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATT 70380 || ||||| || || || || | ||| || || |||||||| | || || | || || Sbjct 111491 TCCTCCATGACGTCGCTGAACACTTTCTTGGTCTCCTTGTGCAGGTTAGAGACAGCGATC 111550 Query 70381 CTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCA 70440 | || || || || || ||||| || |||| || || ||| || || || || ||| Sbjct 111551 CGAGCAGCGAGGATGGCGTAGTCGGGGTGTTTAGTTGTGAGAGTGGCAGCGATCTCTGCA 111610 Query 70441 GCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATG 70500 || ||||| || | || | ||| || |||||| | || | || || || || |||||| Sbjct 111611 GCCAACGTGTCGAGCTCCACAGTGGTGACTCCGCTGTACAAACCCTGGATCACCTTCATG 111670 Query 70501 GCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCT-AATACG 70559 | || | | || || | || || | |||||| || || || || |||| || || Sbjct 111671 GTAATCTGGGCCGGGTCCACAAAGTCAGAGTTCAGCCCGTAGCA-AAGCTTCTGGATGCG 111729 Query 70560 AGATGTAATTTTATCAAACATAAC 70583 ||| || ||||| || ||||| || Sbjct 111730 AGAGGTGATTTTGTCGAACATGAC 111753 >seq35 Length=1322159 Score = 102 bits (112), Expect = 1e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 ||||||| || || || | || || || | || || |||||||| || || | ||| | Sbjct 415119 CCTCATCCCTGCTGATCAGCTCATTGGAGTAGGTCAGACCAGGCATCAGGCCTCTCTTCT 415178 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 | |||||| | ||||||||||| || ||||| ||||||||||| || || |||||||| | Sbjct 415179 TTAGCCAATAGATGGCAGCAAATGAACCAGAGAAGAAGATGCCCTCCACAGCTGCAAAAG 415238 Query 39759 CAACAAGTCTCTCTCC 39774 | |||| || ||| || Sbjct 415239 CCACAATTCGCTCCCC 415254 >seq1980 Length=102293 Score = 96.9 bits (106), Expect = 5e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 69325 ATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTG 69384 |||||||| || ||||| || ||||||| || |||||||||||||| || ||||| || Sbjct 5484 ATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGATTTTGCTGGTTGCTCTTCCTG 5543 Query 69385 TTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGAT 69440 || ||||||||||| || || || | || || || ||||| |||| || ||||| Sbjct 5544 TTGCAGGCGTCCTTATAGAGCATGTATGGTGTCCCGGTTTCTGTCTGTGACTCGAT 5599 Score = 89.7 bits (98), Expect = 7e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 68956 TATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAA 69015 || ||||||||||| || | || | || || ||||| || ||||| | ||| |||| Sbjct 4893 TAGGTTTCATAAGGGCCGTGCTCAGCTGCCAGCTCACAGCTGGCCTCCAGGGCAGCGTAG 4952 Query 69016 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAA 69075 || || || || || |||| | ||||| || || ||| | || |||||||||| Sbjct 4953 TAGATGGTCTCAAAGATCTGAATGTTGAGTAACTGGGCCTCTGGGCTTTCGAATGGATGG 5012 Query 69076 TGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTC 69135 | | ||| ||||| ||||| |||| ||||| || || || || || || || || | | Sbjct 5013 CGCATAAGGATAAAGGCATCAGCCAGACCCTGCACACCGATTCCAATTGGCCTGTGACGC 5072 Query 69136 TTATTTGAACTTTCAGC 69152 | || || |||||||| Sbjct 5073 CTGTTAGACCTTTCAGC 5089 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 || || || || || | |||||||| || ||||||||||| || || || |||| ||| Sbjct 6658 GTGCCAGCGTTGAAGAGAGTAGGAGAGGCATGAGTGAACCACTTCTCTGACAGCAAGTTG 6717 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 || || ||||| ||||| || || || | | ||||||||| | || || | ||||| | Sbjct 6718 TAGGTGTCAATGGCTGAATCAATGTCTCCTTTATGAATTCCAACTGCCACTCTCATCAGC 6777 Query 70111 ATATGCTGAGG 70121 || |||||||| Sbjct 6778 ATGTGCTGAGG 6788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686858844557520