Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1471 105 5e-18
seq133 82.4 6e-11
>seq1471
Length=177575
Score = 105 bits (116), Expect = 5e-18
Identities = 79/93 (85%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 77862 CTTCTCTGACAAACGCCCAGGCATCTTGCTCTGTTGCAAACTTCTTAAATACGGCTGCTG 77921
|| |||||| |||||||||||||||| |||| | |||||||||||| || || ||||
Sbjct 15874 CTCCTCTGAAAAACGCCCAGGCATCTCGCTCCGATGCAAACTTCTTGAAAGATGCAGCTG 15815
Query 77922 GGAATTTGTCTACTTGGCTCTTACATTCATCCC 77954
| ||||| || ||||||||||||||||||||||
Sbjct 15814 GAAATTTCTCCACTTGGCTCTTACATTCATCCC 15782
Score = 93.3 bits (102), Expect = 3e-14
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 77576 AGCGGGTGATTATAACCCCAATATACGCCAATGCCAGCTCGGGCTTGTTTCTGTCCGTTT 77635
|| ||||| || | ||||| || ||||| |||||||||||||||| || |||||||
Sbjct 16715 AGTGGGTGGTTGTGGCCCCAGTACACGCCGATGCCAGCTCGGGCTTTGCTCCGTCCGTTG 16656
Query 77636 GATAAGCAACAGCCGTCAGTGTAGACCACCACGGCGTCACC 77676
| | |||| |||||||| ||||| || ||||| ||||||||
Sbjct 16655 GCTGAGCAGCAGCCGTCGGTGTAAACAACCACAGCGTCACC 16615
Score = 82.4 bits (90), Expect = 6e-11
Identities = 96/127 (76%), Gaps = 2/127 (2%)
Strand=Plus/Minus
Query 77311 CCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATAAAGTCATCCTTGTTGAC 77370
|||||| |||||||||| || | | ||||||||| | |||||| || |||||||
Sbjct 17397 CCAGACCACCTCCAGCTGTGTGTTTAATCTGTCCAGCTTGACAAAGTCTTCTTTGTTGAT 17338
Query 77371 AAC-TGACCCTCCGCCATGCAGCCTCCAGCCGTTCTGCTTCCAGTTCTTAACCCACTTAG 77429
|| ||||| ||| | || ||||||||||||| |||||||||| || ||||| | |
Sbjct 17337 GACCTGACC-TCCAGATTTCAACCTCCAGCCGTTCAGCTTCCAGTTTTTCACCCAGCTGG 17279
Query 77430 TCACACC 77436
|||| ||
Sbjct 17278 TCACGCC 17272
>seq133
Length=897885
Score = 82.4 bits (90), Expect = 6e-11
Identities = 90/118 (76%), Gaps = 4/118 (3%)
Strand=Plus/Plus
Query 87330 TGCTCCCAGTTTACTAAAATCTTTCTTAGATTGAAATGTATAGACTGTCAAGCCAGCAAA 87389
||| |||| ||| || | ||| |||| || || || || ||| | |||| |||| |||
Sbjct 864323 TGCGCCCATTTTGCTGAGGTCTCTCTTGGACTGGAACGTGTAGGCCGTCAGTCCAGTAAA 864382
Query 87390 CACAGCACATGTTa--aaaaaaGCGATTGTAGTATGGTGGAGTATTCATAGAAGGTCA 87445
||||||||| || | || ||||| ||| || || || |||||||||||||||||||
Sbjct 864383 CACAGCACAGGTCAGGAACAAAGC--TTGCAGGATTGTAGAGTATTCATAGAAGGTCA 864438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397427817637090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |