Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq210 89.7 4e-13 >seq210 Length=679747 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| | || |||| |||| || | || || ||||| || || |||||||| Sbjct 555989 TGCCTCCCCTCAGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAG 555930 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | |||| | ||||| ||||| |||||||| | || || | ||| || || || | Sbjct 555929 AGAGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCAGGAG 555870 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | |||||||| || ||| || ||| | | | || | |||||| ||| || | Sbjct 555869 GGATCCCCTCTTTGTCCTGGATTTTAGCTTTGACGTTCTCGATAGTGTCGCTGGGCTCCA 555810 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || | ||||| || || || ||||||||||| ||||| Sbjct 555809 CCTCCAGTGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 555761 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| | | |||| || | ||| | || || ||||| || || |||||||| Sbjct 555761 TGCCTCCCCTAAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAG 555702 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | |||| | ||||| ||||| ||||| || | || || | ||| || || || | Sbjct 555701 AGAGGGTGCGACCATCTTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGGTCAGGAG 555642 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | |||||||| || |||||| ||||| | |||| ||||| ||| || | Sbjct 555641 GGATCCCCTCTTTGTCCTGGATCTTTGCTTTCACATTCTCTATGGTGTCGCTGGGCTCCA 555582 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || | || || |||| || ||||||||||| ||||| Sbjct 555581 CCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 555533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424904269229616