Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq755 219 5e-52 seq1980 86.0 8e-12 >seq755 Length=318311 Score = 219 bits (242), Expect = 5e-52 Identities = 967/1498 (65%), Gaps = 56/1498 (4%) Strand=Plus/Plus Query 110614 CTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGAC 110673 |||||| |||| | ||| || || ||| | ||||| |||| ||||| |||||| Sbjct 109822 CTTCATCTCCTCGTTCCACAGCCCCCTCTCTGTCAGGTCTTTGAGCAGGTGGGGGTTGAC 109881 Query 110674 AATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAA 110733 || |||||| || | || || | ||||||||| | ||||| | || | Sbjct 109882 GATCTGAAACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCGAT 109941 Query 110734 GCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAG 110793 | | || || ||||||| ||| || |||||||||||||| ||||| || |||| || || Sbjct 109942 GGACTCGTTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGCAGCAG 110001 Query 110794 ACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA- 110852 ||||| | | || || | ||| ||||| || | | |||||| | | Sbjct 110002 GCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTC 110061 Query 110853 GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCAC-CCCTTGG-GACGCGGGAGAACC 110910 | | || || || |||||||||| |||| || | |||||| ||| ||||| || Sbjct 110062 GGTCGGCGTCTTCT-CCCACATGTCGTACTGCAGGATGCCCTTGCTGACTGGGGAG--CC 110118 Query 110911 CTCAAAGGTTTCATAGGAACCT---TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGA 110967 ||| | || || |||| || | |||| |||| || |||||||||||||| | Sbjct 110119 CTCGTACGTCTCGTAGGGGCCGAACTCGGCT---GCCAGCTCGCAGCTCGCCTCCAGAGC 110175 Query 110968 TGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA 111027 |||| || ||||| || ||||| | || | | || || || ||||| Sbjct 110176 AGCGTAGTAGATGGTCTCGAAGATGTGGATGTTGAGCAGCTGAGCCTCGGGGCTTTCAAA 110235 Query 111028 TGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCT 111087 | || || | || || | || || | |||||| || || | || || || || Sbjct 110236 CGGGTGACGCATGAGGATGAAGGCGTCTGCTAAACCTTGCACTCCGATTCCGATCGGCCT 110295 Query 111088 GTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGAC 111144 ||| ||| | || || || | ||| ||| || || || | || |||| || | Sbjct 110296 GTGGCGCTTGTTGGAATT---CTCAGCTTCAGGCACTGGGTAGTAGTTGATGTCGATAAT 110352 Query 111145 TCGGTTTAGATTTTTGGTAACAAT--CTTTG-TGATTTCATGAAGTTTTTCATAATCAAA 111201 ||| || |||||| || || ||||| ||| | ||||||| | | ||||| Sbjct 110353 CTTGTTCAGGTTTTTG---ACGATTACTTTGGTGACATACGCCAGTTTTTTAAAGTCAAA 110409 Query 111202 AGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGC 111261 ||| || ||| |||| ||| | |||||||| || |||| ||| || || || Sbjct 110410 AGTCCG---CTCCGGGGTGACGTACATGTTGAGGGCGATGGAGGCCAGATTACAGACCGC 110466 Query 111262 CGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGT 111321 ||| || | ||||| || | |||||||| || | |||| | ||| || || Sbjct 110467 TACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAGAGGTTGCTGCACTTGATGGT 110526 Query 111322 CCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGT 111381 |||| ||||| ||||| |||||| ||||||| || || ||||| |||||||| ||||| Sbjct 110527 GCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGT 110586 Query 111382 CCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGG 111440 |||||||||||||| || | || || || | ||| | | | | | || || | Sbjct 110587 ACCCGTCTCCGTCTGCGACTCGATGATGGCGTACCACAGCTGCTGAGCCTTCACCACACG 110646 Query 111441 CGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCG 111500 | ||||||| || ||| ||| ||| | |||||||| | ||||||||||| ||| | | Sbjct 110647 C-TTGGCCCTCCCTTCCTTCTCATACCTGGTGTAGAGCTCCTCAAACTCCTC-CCCCCAG 110704 Query 111501 C-GTCGGAGAGACCTGG---TGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTT-- 111554 | ||| || || || || ||| ||||| | |||||||| | || || Sbjct 110705 CACTCGTCCAGTCCAGGACAGGCGTTG---GGACACATCAGAGACCA--GTCCTGGTTGC 110759 Query 111555 CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACC 111614 ||| |||| ||||||||| || || || ||||| |||| | || || ||||| || Sbjct 110760 TCTCCACCCTCTTCATGAACAGATCGGGGATCCAAAGGGCGTAGAAAAGGTCTCTGGCCC 110819 Query 111615 GAGCCTCTTCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGC 111673 ||| || | ||| ||| || | | ||| ||||| || | | || |||| Sbjct 110820 TCTGCTCCTCCTTTCCTGTGTT-CTTCTTCAGCTCGAGGAAGTCGAACACGTCAAAGTGC 110878 Query 111674 CATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATA 111729 || ||||| | || | |||| | ||| || | | | ||| | || | || || Sbjct 110879 CACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCTTGTTG-CCACCCTGGTCGACGTA 110937 Query 111730 GCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT 111789 ||||| ||| ||| | || | ||||| || | | || | || | ||||| || Sbjct 110938 ACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCCGTTGGAGTTGCCATTGGT 110997 Query 111790 CCCCCGAATACGAGATTTAT-TGGCTCTCA--CATCATGGATGTGCATCCCAATACCCCC 111846 || || || || | ||| ||| | || | || || || || || || Sbjct 110998 -ACCAGAGATGTAGCTTCCTGTGGATCTGATGCAGC--TGACCGCCACACCGATGCCTCC 111054 Query 111847 AGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTC 111906 |||| |||| ||||| | ||||||| | | ||||| ||||||| || | ||| ||| Sbjct 111055 AGCCGACTTGGAGATGAGGGCACACTGCTTCAGAGTGTCATAGATGCCTTCGATGCTGTC 111114 Query 111907 CTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAA 111966 || || |||||| |||||||| ||||||| ||| || || || ||||| ||||| Sbjct 111115 GTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTTCCAGCGTTGAA 111174 Query 111967 GAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGA 112025 ||| || || | ||||| ||||| || | | |||| | || ||| ||||| | | Sbjct 111175 GAGAGTCGGGGAGGCGTGGGTGAAC-CACTTCTCCGACAGCAGGTTGTAGGTCTCGATGG 111233 Query 112026 CAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 | | ||| ||||| |||||| || | | |||| ||||| ||||| ||| || Sbjct 111234 CTGCATCGATGTCCGTTTTGTGGATTCCTACGGACACCCTCATGAGCATGTGCTGCGG 111291 >seq1980 Length=102293 Score = 86.0 bits (94), Expect = 8e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324 |||||| || |||||||||| || ||||| || | ||| || || || || Sbjct 5459 CTCATCTTTGCTGGTGTACTCTACGATCTCTGTGCACAGATTGCTGGATTTGATGGTGCC 5518 Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384 || ||| | ||||| |||||| ||||||| || ||||| ||||||||||| || ||||| Sbjct 5519 CAGATTTTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTATAGAGCATGTATGGTGTCCC 5578 Query 111385 CGTCTCCGTCTGTGA 111399 || || |||||||| Sbjct 5579 GGTTTCTGTCTGTGA 5593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627986326372800