Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq755 219 5e-52 seq1980 86.0 8e-12 seq35 82.4 9e-11 >seq755 Length=318311 Score = 219 bits (242), Expect = 5e-52 Identities = 861/1332 (65%), Gaps = 38/1332 (3%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| ||| | ||||| | ||| | | |||| |||||||||| ||| ||||| |||||| Sbjct 109916 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGAG 109975 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 ||||||||||| || |||| || |||||||| | | || |||| || ||| Sbjct 109976 GCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCC 110035 Query 118302 TTGAG-AGCGTCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTG 118357 || || ||| ||| |||| | || | | |||| | || ||||| || |||| Sbjct 110036 TTCAGCAGCTTCC-AGTCCCACAGGTCGGTCGGCGTCTTCTCC---CACATGTCGTACTG 110091 Query 118358 GAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC 118417 ||||| || | | |||| || ||||| | ||||| || ||||| | | || Sbjct 110092 CAGGATGCCCTTGCTGACTGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAACTCGGCTGC 110151 Query 118418 CAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT 118477 || ||| |||||||||| || || |||| || || || || || ||| | || | Sbjct 110152 CAGCTCGCAGCTCGCCTCCAGAGCAGCGTAGTAGATGGTCTCGAAGATGTGGATGTTGAG 110211 Query 118478 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACC 118537 || |||||| | ||||||| | | || | || || | || || | ||| Sbjct 110212 CAGCTGAGCCTCGGGGCTTTCAAACGGGTGACGCATGAGGATGAAGGCGTCTGCTAAACC 110271 Query 118538 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGG 118597 ||| || |||| || || || | || | | | || || ||| ||| ||| || Sbjct 110272 TTGCACTCCGATTCCGATCGGCCTGTGGCGCTTGTTGGAATTCTCAGCTTCAGGCACTGG 110331 Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657 || | || | ||||||| | | || || |||||| || || || |||| | Sbjct 110332 GTAGTAGTTGATGTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTGACATACGC 110391 Query 118658 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGA 118717 || |||| | |||||| | || ||| |||| ||| | |||||||| || Sbjct 110392 CAGTTTTTTAAAGTCAAAAGTCCG---CTCCGGGGTGACGTACATGTTGAGGGCGATGGA 110448 Query 118718 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAA 118777 ||||||||||| || | ||| || | ||||| || | ||||| ||||| | Sbjct 110449 GGCCAGATTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAGAG 110508 Query 118778 GTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 118837 ||| | ||| |||||||||| |||| || || ||| |||| || || || || Sbjct 110509 GTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTT 110568 Query 118838 GTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATC 118897 ||| |||||||| ||||| ||||||||||| || |||| || || || | || ||| | Sbjct 110569 GTACAGCATGTACGGCGTACCCGTCTCCGTCTGCGACTCGATGATGGCGTACC--ACAGC 110626 Query 118898 GGC--AGCTGGCA-CAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGC 118954 || ||| || || || ||||| | ||| || | ||| ||| | |||||||| | Sbjct 110627 TGCTGAGCCTTCACCACACGC-TTGGCCCTCCCTTCCTTCTCATACCTGGTGTAGAGCTC 110685 Query 118955 TTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGG---TGCCTTATCTGGGCAGAAGAG 119011 |||||||| || ||| | ||| || || || || || || || | || Sbjct 110686 CTCAAACTCCTCCCCCCAGCACTCGTCCAGTCCAGGACAGGCGTT---GGGACACATCAG 110742 Query 119012 AGACCATTGACCACCCT--CCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 119069 |||||| | || | ||| |||| ||||||||| || || |||||||| || || Sbjct 110743 AGACCA--GTCCTGGTTGCTCTCCACCCTCTTCATGAACAGATCGGGGATCCAAAGGGCG 110800 Query 119070 GAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128 |||| || || | | | ||| || | | || || || || ||| | || Sbjct 110801 TAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCGAGGAA 110859 Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACGAC 119184 ||| | | || ||||||||| |||| ||||| |||| | || || | Sbjct 110860 GTCGAACACGTCAAAGTGCCACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCTTGTT 110919 Query 119185 GACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATAC 119244 | ||| |||||| || || | ||| ||| ||| | || | ||||| || | || | Sbjct 110920 G-CCACCCTGGTCGACGTAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCC 110978 Query 119245 CATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTAT-TGGCTCTGACATCGTGGATG 119303 | | ||| | |||||| || || || || | | ||| ||||| | || Sbjct 110979 CGTTGGAGTTGCCATTGGT-ACCAGAGATGTAGCTTCCTGTGGATCTGATGCAGCTGACC 111037 Query 119304 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 119363 || ||| || || || ||| |||| ||||| | || |||| | | ||| || | ||| Sbjct 111038 GCCACACCGATGCCTCCAGCCGACTTGGAGATGAGGGCACACTGCTTCAGAGTGTCATAG 111097 Query 119364 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG 119423 || || ||||| ||| | || | |||| ||||||||||| |||| || |||||| Sbjct 111098 ATGCCTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTG 111157 Query 119424 GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTT 119482 || ||||||||||||||||| || | |||||| ||||| || | | |||| | Sbjct 111158 TTGGTTCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAAC-CACTTCTCCGACAGCAG 111216 Query 119483 GTCGTAGGTCTC 119494 || ||||||||| Sbjct 111217 GTTGTAGGTCTC 111228 >seq1980 Length=102293 Score = 86.0 bits (94), Expect = 8e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| ||| | ||||| | ||||| | |||||||||| |||| ||| || || ||||| Sbjct 4482 TAGATGTTGCTGGTGTAAGCCTCAATGGACTCATTGTTGCCCAGGATCTGAGCAGTGGAA 4541 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 118273 ||||||||||| || |||| || |||||||| Sbjct 4542 GCTGTGGGCATCGGAGCCAAAAGCAGGCTGTT 4573 >seq35 Length=1322159 Score = 82.4 bits (90), Expect = 9e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094 |||| || | | ||| || ||||| ||| || |||||| ||||| || || | ||||| Sbjct 415119 CCTCATCCCTGCTGATCAGCTCATTGGAGTAGGTCAGACCAGGCATCAGGCCTCTCTTCT 415178 Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 130144 | | ||| | || ||| |||||| |||||||||||||| ||||||||| Sbjct 415179 TTAGCCAATAGATGGCAGCAAATGAACCAGAGAAGAAGATGCCCTCCACA 415228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618390224300080