Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq755 219 5e-52
seq1980 86.0 8e-12
seq35 82.4 9e-11
>seq755
Length=318311
Score = 219 bits (242), Expect = 5e-52
Identities = 861/1332 (65%), Gaps = 38/1332 (3%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| ||| | ||||| | ||| | | |||| |||||||||| ||| ||||| ||||||
Sbjct 109916 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGAG 109975
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
||||||||||| || |||| || |||||||| | | || |||| || |||
Sbjct 109976 GCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCC 110035
Query 118302 TTGAG-AGCGTCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTG 118357
|| || ||| ||| |||| | || | | |||| | || ||||| || ||||
Sbjct 110036 TTCAGCAGCTTCC-AGTCCCACAGGTCGGTCGGCGTCTTCTCC---CACATGTCGTACTG 110091
Query 118358 GAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC 118417
||||| || | | |||| || ||||| | ||||| || ||||| | | ||
Sbjct 110092 CAGGATGCCCTTGCTGACTGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAACTCGGCTGC 110151
Query 118418 CAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT 118477
|| ||| |||||||||| || || |||| || || || || || ||| | || |
Sbjct 110152 CAGCTCGCAGCTCGCCTCCAGAGCAGCGTAGTAGATGGTCTCGAAGATGTGGATGTTGAG 110211
Query 118478 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACC 118537
|| |||||| | ||||||| | | || | || || | || || | |||
Sbjct 110212 CAGCTGAGCCTCGGGGCTTTCAAACGGGTGACGCATGAGGATGAAGGCGTCTGCTAAACC 110271
Query 118538 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGG 118597
||| || |||| || || || | || | | | || || ||| ||| ||| ||
Sbjct 110272 TTGCACTCCGATTCCGATCGGCCTGTGGCGCTTGTTGGAATTCTCAGCTTCAGGCACTGG 110331
Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657
|| | || | ||||||| | | || || |||||| || || || |||| |
Sbjct 110332 GTAGTAGTTGATGTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTGACATACGC 110391
Query 118658 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGA 118717
|| |||| | |||||| | || ||| |||| ||| | |||||||| ||
Sbjct 110392 CAGTTTTTTAAAGTCAAAAGTCCG---CTCCGGGGTGACGTACATGTTGAGGGCGATGGA 110448
Query 118718 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAA 118777
||||||||||| || | ||| || | ||||| || | ||||| ||||| |
Sbjct 110449 GGCCAGATTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAGAG 110508
Query 118778 GTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 118837
||| | ||| |||||||||| |||| || || ||| |||| || || || ||
Sbjct 110509 GTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTT 110568
Query 118838 GTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATC 118897
||| |||||||| ||||| ||||||||||| || |||| || || || | || ||| |
Sbjct 110569 GTACAGCATGTACGGCGTACCCGTCTCCGTCTGCGACTCGATGATGGCGTACC--ACAGC 110626
Query 118898 GGC--AGCTGGCA-CAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGC 118954
|| ||| || || || ||||| | ||| || | ||| ||| | |||||||| |
Sbjct 110627 TGCTGAGCCTTCACCACACGC-TTGGCCCTCCCTTCCTTCTCATACCTGGTGTAGAGCTC 110685
Query 118955 TTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGG---TGCCTTATCTGGGCAGAAGAG 119011
|||||||| || ||| | ||| || || || || || || || | ||
Sbjct 110686 CTCAAACTCCTCCCCCCAGCACTCGTCCAGTCCAGGACAGGCGTT---GGGACACATCAG 110742
Query 119012 AGACCATTGACCACCCT--CCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 119069
|||||| | || | ||| |||| ||||||||| || || |||||||| || ||
Sbjct 110743 AGACCA--GTCCTGGTTGCTCTCCACCCTCTTCATGAACAGATCGGGGATCCAAAGGGCG 110800
Query 119070 GAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128
|||| || || | | | ||| || | | || || || || ||| | ||
Sbjct 110801 TAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCGAGGAA 110859
Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACGAC 119184
||| | | || ||||||||| |||| ||||| |||| | || || |
Sbjct 110860 GTCGAACACGTCAAAGTGCCACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCTTGTT 110919
Query 119185 GACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATAC 119244
| ||| |||||| || || | ||| ||| ||| | || | ||||| || | || |
Sbjct 110920 G-CCACCCTGGTCGACGTAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCC 110978
Query 119245 CATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTAT-TGGCTCTGACATCGTGGATG 119303
| | ||| | |||||| || || || || | | ||| ||||| | ||
Sbjct 110979 CGTTGGAGTTGCCATTGGT-ACCAGAGATGTAGCTTCCTGTGGATCTGATGCAGCTGACC 111037
Query 119304 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 119363
|| ||| || || || ||| |||| ||||| | || |||| | | ||| || | |||
Sbjct 111038 GCCACACCGATGCCTCCAGCCGACTTGGAGATGAGGGCACACTGCTTCAGAGTGTCATAG 111097
Query 119364 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG 119423
|| || ||||| ||| | || | |||| ||||||||||| |||| || ||||||
Sbjct 111098 ATGCCTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTG 111157
Query 119424 GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTT 119482
|| ||||||||||||||||| || | |||||| ||||| || | | |||| |
Sbjct 111158 TTGGTTCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAAC-CACTTCTCCGACAGCAG 111216
Query 119483 GTCGTAGGTCTC 119494
|| |||||||||
Sbjct 111217 GTTGTAGGTCTC 111228
>seq1980
Length=102293
Score = 86.0 bits (94), Expect = 8e-12
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| ||| | ||||| | ||||| | |||||||||| |||| ||| || || |||||
Sbjct 4482 TAGATGTTGCTGGTGTAAGCCTCAATGGACTCATTGTTGCCCAGGATCTGAGCAGTGGAA 4541
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 118273
||||||||||| || |||| || ||||||||
Sbjct 4542 GCTGTGGGCATCGGAGCCAAAAGCAGGCTGTT 4573
>seq35
Length=1322159
Score = 82.4 bits (90), Expect = 9e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094
|||| || | | ||| || ||||| ||| || |||||| ||||| || || | |||||
Sbjct 415119 CCTCATCCCTGCTGATCAGCTCATTGGAGTAGGTCAGACCAGGCATCAGGCCTCTCTTCT 415178
Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 130144
| | ||| | || ||| |||||| |||||||||||||| |||||||||
Sbjct 415179 TTAGCCAATAGATGGCAGCAAATGAACCAGAGAAGAAGATGCCCTCCACA 415228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618390224300080
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