Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq755 257 2e-63 seq35 95.1 1e-14 >seq755 Length=318311 Score = 257 bits (284), Expect = 2e-63 Identities = 971/1495 (65%), Gaps = 50/1495 (3%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||| | ||| || | || || || ||||| ||| | | | Sbjct 111291 CCGCAGCACATGCTCATGAGGGTGTCCGTAGGAATCCACAAAACGGACATCGATGCAGCC 111232 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || | |||| | | || ||||| ||||| | || || ||||| Sbjct 111231 ATCGAGACCTACAACCTGCTGTCGGAGAAGTG-GTTCACCCACGCCTCCCCGACTCTCTT 111173 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| ||||| || || || || ||||||| |||||||| |||||| || || || Sbjct 111172 CAACGCTGGAACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAAGACGA 111113 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | ||| | || ||||||| ||||| | | ||||||| | ||||| |||| |||||| Sbjct 111112 CAGCATCGAAGGCATCTATGACACTCTGAAGCAGTGTGCCCTCATCTCCAAGTCGGCTGG 111053 Query 104461 GGGTATTGGGATGCACATCCATGATG--TGAGAGCCA-ATAAATCTCGTATTCGGGGGAC 104517 || || || || || | || | ||| ||| | || || || || || Sbjct 111052 AGGCATCGGTGTGGCGGTCA--GCTGCATCAGATCCACAGGAAGCTACATCTCTGGT-AC 110996 Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577 ||||| | || | || | | || ||||| | || | ||| ||| ||||| || Sbjct 110995 CAATGGCAACTCCAACGGGCTCGTCCCCATGCTGAGAGTTTACAACAACACGGCGCGTTA 110936 Query 104578 TGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 || | || | ||| | | | || ||| | |||| | || | ||||| |||| Sbjct 110935 CGTCGACCAGGGTGG-CAACAAGAGACCCGGAGCCTTCGCCATGTACTTGGAGCCGTGGC 110877 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 || || | | || ||||| ||| || ||| ||| | |||||| | || Sbjct 110876 ACTTTGACGTGTTCGACTTCCTCGAGCTGAAGAAGAACACAGGAAAGGAGGAGCAGAGGG 110817 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 | | || || |||| ||| || ||||| || ||||| ||||||||||| || ||||| Sbjct 110816 CCAGAGACCTTTTCTACGCCCTTTGGATCCCCGATCTGTTCATGAAGAGGGT---GGAGA 110760 Query 104754 GTGGCAAT---TGGTCTCTCTTTTGTCCAGACAAGGCA---CCTGGTCTCTCCGA-TGCC 104806 | | | |||||||| | ||||| ||| || ||||| || ||| ||| Sbjct 110759 GCAACCAGGACTGGTCTCTGATGTGTCC---CAACGCCTGTCCTGGACTGGACGAGTGCT 110703 Query 104807 GTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCG 104866 | ||| ||||||||||| | || ||||| | ||| ||| | ||||| |||| | ||| Sbjct 110702 GGGGG-GAGGAGTTTGAGGAGCTCTACACCAGGTATGAGAAGGAAGGGAGGGCCAA-GCG 110645 Query 104867 AC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925 |||| ||| | ||||| | || || || |||| || || ||||| ||||| Sbjct 110644 TGTGGTGAAGGCTCAGCAGCTGTGGTACGCCATCATCGAGTCGCAGACGGAGACGGGTAC 110585 Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985 || |||||||| |||||||||||||| ||| ||||| || || ||||| |||| Sbjct 110584 GCCGTACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGCAC 110525 Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 105045 |||||| | ||| ||||| ||||||||| | |||| || | | || ||| || Sbjct 110524 CATCAAGTGCAGCAACCTCTGCACAGAAATCGTCGAATACACCAGCCATGACGAGGTAGC 110465 Query 105046 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT 105105 || ||||| || || || ||||| ||| || ||| || || ||| ||| || Sbjct 110464 GGTCTGTAATCTGGCCTCCATCGCCCTCAACATGTACGTCACCCCGGAGCG---GACTTT 110408 Query 105106 TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTAT 105165 ||| | | ||||||| | || || ||| || ||||||||| |||| |||| Sbjct 110407 TGACTTTAAAAAACTGGCGTATGTCACCAAAGTAATCGTCAAAAACCTGAACAAGATTAT 110348 Query 105166 TGATAGAAATTTTTACCCCGTTGAGACTG---CTCGTAAATCTAATATGAGACACCGTCC 105222 || | || | ||||| || | ||| || || || || | | | ||| | || Sbjct 110347 CGACATCAACTACTACCCAGT---GCCTGAAGCTGAGAATTCCAACAAGCGCCACAGGCC 110291 Query 105223 AATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGA 105282 || || |||| || || ||| | || || | ||||| || || ||| | ||||| Sbjct 110290 GATCGGAATCGGAGTGCAAGGTTTAGCAGACGCCTTCATCCTCATGCGTCACCCGTTTGA 110231 Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342 | ||| || || |||| | ||| || |||||||| || |||| ||||| Sbjct 110230 AAGCCCCGAGGCTCAGCTGCTCAACATCCACATCTTCGAGACCATCTACTACGCTGCTCT 110171 Query 105343 TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 105402 |||||||| | ||| |||||| | || || || || || | ||||| || || Sbjct 110170 GGAGGCGAGCTGCGAGCTGGCAGCCGAGTTCGGCCCCTACGAGACGTACGAGGGCTCCCC 110111 Query 105403 AGCTTCA-CAAGGGG-TGCTTCAATTTGATATGTGGGA--AGGTGA-GACCAAGCTTCAC 105457 || ||| |||||| | || || | || |||||||| || | |||| | || Sbjct 110110 AG--TCAGCAAGGGCATCCTGCAGTACGACATGTGGGAGAAGACGCCGACCGACCTG--- 110056 Query 105458 TACGACTGGGAAGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCT 105516 | |||||| ||||| || ||||| ||| | || || | | ||||| || || Sbjct 110055 TGGGACTGG-AAGCTGCTGAAGGAGAAGATCGCCAAAAACGGCGTGAGGAACAGCCTGCT 109997 Query 105517 CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 105576 |||| || ||||| |||||||||||||| || ||| ||||||| || || | | | || Sbjct 109996 GCTGGCCCCGATGCCCACAGCCTCCACCGCCCAGATCCTGGGTAACAACGAGTCCATCGA 109937 Query 105577 ACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 105636 ||||||| | |||||||| | || || | || |||||| ||| ||||| Sbjct 109936 GGCCTACACCAGCAACATCTACACCCGCAGGGTTCTGTCCGGCGAGTTTCAGATCGTCAA 109877 Query 105637 CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 105691 | || || | | ||||| | ||||| || || ||| | |||| |||||| Sbjct 109876 CCCCCACCTGCTCAAAGACCTGACAGAGAGGGGGCTGTGGAACGAGGAGATGAAG 109822 >seq35 Length=1322159 Score = 95.1 bits (104), Expect = 1e-14 Identities = 95/121 (79%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GC 94862 |||||| | | || ||||| ||| ||||| ||||||||||||||||| || ||| || Sbjct 415251 GAGCGAATTGTGGCTTTTGCAGCTGTGGAGGGCATCTTCTTCTCTGGTTCATT-TGCTGC 415193 Query 94863 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 94922 || |||||||| |||||| |||| || ||||| ||||| || |||||| ||||| || Sbjct 415192 CATCTATTGGCTAAAGAAGAGAGGCCTGATGCCTGGTCTGACCTACTCCAATGAGCTGAT 415133 Query 94923 C 94923 | Sbjct 415132 C 415132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583218382358320