Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq755 331 1e-85 seq1980 91.5 2e-13 seq735 89.7 6e-13 seq35 84.2 2e-11 >seq755 Length=318311 Score = 331 bits (366), Expect = 1e-85 Identities = 891/1353 (66%), Gaps = 35/1353 (3%) Strand=Plus/Plus Query 78508 AACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCG 78567 |||||||||| ||| || ||| |||||||||| | ||||| | ||||| | |||| Sbjct 109889 AACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCG 109948 Query 78568 TTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATTC 78627 ||||| |||| |||||||||||| ||||| || ||||| || || | ||| || ||| Sbjct 109949 TTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTC 110008 Query 78628 CGAAGACCATGCGTCTTGATCTCGACCTTTAGG------CCGTCCCAAAATTCATTCGCC 78681 | | || | | ||||| |||| || | |||||| | || ||| | Sbjct 110009 CTCACGCCGTTTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTCGGTCGGC 110068 Query 78682 GCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGTC 78741 | || |||||||||| || ||||| |||| | | || || |||| | ||||| Sbjct 110069 GTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACTGGGGAGCCCTCGTACGTC 110128 Query 78742 TCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACACA 78801 ||||| | || ||| || || ||||| | | ||| || |||| ||| | Sbjct 110129 TCGTAGGGGCCGAACTCGGCTGCCAGCTCGCAGCTCGCCTCCAGAGCAGCGTAGTAGATG 110188 Query 78802 GCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGC 78861 | |||||||||| |||||||| | |||| || || |||| | | | Sbjct 110189 GTCTCGAAGATGTGGATGTTGAGCAGCTGAGCCTCGGGGCTTTCAAACGGGTGACGCATG 110248 Query 78862 ATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTG 78921 | |||||| | || || | || || || ||||| ||||||| | ||||||| ||||| Sbjct 110249 AGGATGAAGGCGTCTGCTAAACCTTGCACTCCGATTCCGATCGGCCTGTGGCGCTTGTTG 110308 Query 78922 CTCTTTCGGGCCGCCTCGGTC---GGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTA 78978 || | || || | | ||||| |||| ||||| | ||||||||| Sbjct 110309 GAATTCT---CAGCTTCAGGCACTGGGTAGTAGTTGATGTCGATAATCTTGTTCAGGTTT 110365 Query 78979 CGCGTGACGA---CCCGAGTCACCTCGTACAATTTGGCGAAATCAAAA-TGATTTCCTT- 79033 |||||| | || || | || ||| || |||||| | ||| Sbjct 110366 T---TGACGATTACTTTGGTGACATACGCCAGTTTTTTAAAGTCAAAAGTCCGCTCCGGG 110422 Query 79034 -TGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTA 79092 ||| | | | ||| | || ||||| || || || || |||||| |||| Sbjct 110423 GTGACGTACATGTTGAGGGCGATGGAGGCCAGATTACAGACCGCTACCTCGTCATGGCTG 110482 Query 79093 GAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGG 79152 | |||| |||||||||||| | || ||||||||||||| | |||| |||| Sbjct 110483 GTGTATTCGACGATTTCTGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGG 110542 Query 79153 TTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGA 79212 ||||||||| ||| |||||||| ||||| |||||||||||| || ||||| ||| Sbjct 110543 TTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCCGTCTCCGTCTGC 110602 Query 79213 CTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGT 79272 || || | | ||| ||| | | | | ||| || || |||| || || | Sbjct 110603 GACTCGATGATGGCGTACCACAGCTGCTGAGCCTTCACCACACGCTTGGCCCTCCCTTCC 110662 Query 79273 GCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGG 79332 | ||| | ||| | ||| | || ||||||| || ||| ||| || || Sbjct 110663 TTCTCATACCTGGTGTAGAGCTCCTCAAACTCCTCCCCCCAGCACTCGTCCAGTCCAGGA 110722 Query 79333 CACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGG 79392 || ||| || |||||||| |||||||| || |||| ||| ||| |||||| || Sbjct 110723 CAGGCGTTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAGA 110782 Query 79393 TCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTC 79452 || |||||||| ||||| ||| ||||| | | | | |||||| | || |||| Sbjct 110783 TCGGGGATCCAAAGGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTC 110842 Query 79453 AGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAAC 79512 ||||||||| ||||| | | ||| |||||||||||||| || |||||||| Sbjct 110843 TTCTTCAGCTCGAGGAAGTCGAACACGTCAAAGTGCCACGGCTCCAAGTACATGGCGAAG 110902 Query 79513 GAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGG 79572 | || | |||| ||| ||||||| |||||| || |||||||||||| |||||| Sbjct 110903 GCTCCGGGTCTCTTGTTGCCACCCTGGTCGACGTAACGCGCCGTGTTGTTGTAAACTCTC 110962 Query 79573 AGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCC 79632 |||||||| |||| |||| || | ||| || || || || |||| ||| || Sbjct 110963 AGCATGGGGACGAGCCCGTTGGAGTTGCCATTGGTACCAGAGA----TGTA--GCT-TCC 111015 Query 79633 CGAATGTTCGA-GCAG-TG-----GATTCCGATGCCCCCGGACCACTTGGAGATGTGCGC 79685 | | || |||| || | |||||||| || | | ||||||||||| | || Sbjct 111016 TGTGGATCTGATGCAGCTGACCGCCACACCGATGCCTCCAGCCGACTTGGAGATGAGGGC 111075 Query 79686 GCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAA 79745 |||| ||| || || || |||||||| ||||| |||||| ||||| |||| |||||| Sbjct 111076 ACACTGCTTCAGAGTGTCATAGATGCCTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAA 111135 Query 79746 GCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGT 79805 |||||| |||| |||||| |||| || || ||||||||||| ||||| | ||||| || Sbjct 111136 GCAGCTGGACAGCTGTGGCCTGTTGGTTCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGT 111195 Query 79806 GAAGAACTTTTGGCTCATCAGATCGTACGTCTC 79838 ||| |||| | || ||| | ||| ||||| Sbjct 111196 GAACCACTTCTCCGACAGCAGGTTGTAGGTCTC 111228 Score = 242 bits (268), Expect = 4e-59 Identities = 857/1331 (64%), Gaps = 41/1331 (3%) Strand=Plus/Minus Query 19165 CGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAA 19224 |||||| ||| ||||| || |||||| ||||| ||||| | ||||| || ||||| Sbjct 111229 CGAGACCTACAACCTGCTGTCGGAGAAGTGGTTCACCCACGCCTCCCCGACTCTCTTCAA 111170 Query 19225 CGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAG 19284 ||| || || |||| || ||| |||| ||||| ||||| | || ||||| || ||||| Sbjct 111169 CGCTGGAACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAAGACGACAG 111110 Query 19285 CATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGG 19344 ||| || |||||||| || || || ||| |||| || | ||||||||||| | | || || Sbjct 111109 CATCGAAGGCATCTATGACACTCTGAAGCAGTGTGCCCTCATCTCCAAGTCGGCTGGAGG 111050 Query 19345 TATCGG------GATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGAC 19398 ||||| | || |||| ||| | || | || | ||| ||| || Sbjct 111049 CATCGGTGTGGCGGTCAGCTGC------ATCAGATCCACAGGAAGCTACATCTCTGGTAC 110996 Query 19399 GAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTA 19458 || || || |||| ||||||| ||||| | || | |||||||||||| | || Sbjct 110995 CAATGGCAACTCCAACGGGCTCGTCCCCATGCTGAGAGTTTACAACAACACGGCGCGTTA 110936 Query 19459 CGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCA 19518 |||| ||||||| ||| ||| | || | |||||||| ||| | ||||| ||||| Sbjct 110935 CGTCGACCAGGGTGGCAACAAGAGACCCGGAGCCTTCGCCATGTACTTGGAGCCGTGGCA 110876 Query 19519 CGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTG 19578 | ||||| | || |||||||| ||| |||| || | |||||| | | Sbjct 110875 CTTTGACGTGTTCGACTTCCTCGAGCTGAAGAAGAACACAGGAAAGGAGGAGCAGAGGGC 110816 Query 19579 TCGCGACCTCTTC-ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGG 19637 | ||||| ||| ||| |||| ||||| || || || |||||| ||| ||| |||| Sbjct 110815 CAGAGACCTTTTCTACGCCCTT-TGGATCCCCGATCTGTTCATGAAGAGGGTGGAGAGCA 110757 Query 19638 ACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCG 19697 || | || ||| |||||||| || ||| || ||||| || ||| || || | Sbjct 110756 ACCAGGACTGGTCTCTGATGTGTCCCAACGCCTGTCCTGGACTGGACGAGTGCTGGGGGG 110697 Query 19698 AGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCC 19757 ||| ||| | ||| | ||| | || | | || || |||| ||||| Sbjct 110696 AGGAGTTTGAGGAGCTCTACACCAGGTATGAGAAGGAAGGGAGGGCCAAGCGTGTGGTGA 110637 Query 19758 GGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACA 19817 ||| | | | | ||| || | || || | ||| ||||| || || ||||||| Sbjct 110636 AGGCTCAGCAGCTGTGGTACGCCATCATCGAGTCGCAGACGGAGACGGGTACGCCGTACA 110577 Query 19818 TGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGT 19877 || ||||| |||||| ||| ||| || ||| |||| | ||| | ||||||| Sbjct 110576 TGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGCACCATCAAGT 110517 Query 19878 CGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTA 19937 |||||| || || |||||| | || ||| | |||||| || || |||| Sbjct 110516 GCAGCAACCTCTGCACAGAAATCGTCGAATACACCAGCCATGACGAGGTAGCGGTCTGTA 110457 Query 19938 ATCTGGCGTCCCTGTGCCTGCCGACTTTCGTCA---AGGCCTCCTCCTTCGACTTTGCCA 19994 ||||||| ||| | ||| | | ||||| || | || |||||| | Sbjct 110456 ATCTGGCCTCCATCGCCCTCAACATGTACGTCACCCCGGAGCGGACTTTTGACTTTAAAA 110397 Query 19995 AATTGTACGAGGTGACCCGGG---TCGTCACGCGTAATCTGAATCGCGTCATCGATCGGA 20051 || || | || ||| | |||||| || ||||| | ||||| | Sbjct 110396 AACTGGCGTATGTCACCAAAGTAATCGTCA---AAAACCTGAACAAGATTATCGACATCA 110340 Query 20052 ACTTTTACCC---GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGA 20108 ||| ||||| | | || || | | || || || | ||||||| ||||||||| | Sbjct 110339 ACTACTACCCAGTGCCTGAAGCTGAG---AATTCCAACAAGCGCCACAGGCCGATCGGAA 110283 Query 20109 TCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCA 20168 |||| || || || | || |||| ||||| | | | | | | || || ||| Sbjct 110282 TCGGAGTGCAAGGTTTAGCAGACGCCTTCATCCTCATGCGTCACCCGTTTGAAAGCCCCG 110223 Query 20169 AGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAAT 20228 |||| | |||||||| |||||||||| || | ||| |||| || ||||| Sbjct 110222 AGGCTCAGCTGCTCAACATCCACATCTTCGAGACCATCTACTACGCTGC---TCTGGAGG 110166 Query 20229 CG---TGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGT 20285 || ||||| || || ||| |||||| |||||||||| | |||| || || | Sbjct 110165 CGAGCTGCGAGCTGGCAGCCGAGTTCGGCCCCTACGAGACGTACGAGGGCTCCCCAGTCA 110106 Query 20286 CCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGAGTTTTGGAGC---- 20341 | |||| ||||| ||| |||||||||| || || || | ||| | Sbjct 110105 GCAAGGGCATCCTGCAGTACGACATGTGGGAGAAGACGCCGACCGACCTGTGGGACTGGA 110046 Query 20342 -GC-CCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCA 20399 || || |||| ||||| | |||| | | ||| |||| | || || | Sbjct 110045 AGCTGCTGAAGGAGAAGATCGCCAAAAACGGCGTGAGGAACAGCCTGCTGCTGGCCCCGA 109986 Query 20400 TGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGA 20459 |||| || ||||| |||||||||||| |||| ||||||||| | ||||| | ||||| | Sbjct 109985 TGCCCACAGCCTCCACCGCCCAGATCCTGGGTAACAACGAGTCCATCGAGGCCTACACCA 109926 Query 20460 CCAACATCTAC 20470 |||||||||| Sbjct 109925 GCAACATCTAC 109915 Score = 95.1 bits (104), Expect = 1e-14 Identities = 88/111 (79%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 20610 CCCAGA--ACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCAT 20667 |||||| |||| ||| | | |||| ||||| ||||||||| | ||||||| ||| | Sbjct 109440 CCCAGATGACCTGAAGCAGCTCTACAAAACCGTGTGGGAAATCTCCCAGAAGACCATACT 109381 Query 20668 CGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAA 20718 | ||||||||||| ||||||||||||||||||||| |||||| || || Sbjct 109380 GAAGATGGCGGCCGACCGCGGCGCCTACATCGACCAGAGCCAGTCCCTGAA 109330 >seq1980 Length=102293 Score = 91.5 bits (100), Expect = 2e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 79098 CTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCT 79157 ||| | ||| |||||||||| ||| || ||||||||||| | || | ||||||||| Sbjct 5477 CTCTACGATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGATTTTGCTGGTTGCT 5536 Query 79158 CTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTC 79205 |||| ||| ||||||||||| ||| |||||| || |||||||| || Sbjct 5537 CTTCCTGTTGCAGGCGTCCTTATAGAGCATGTATGGTGTCCCGGTTTC 5584 >seq735 Length=345074 Score = 89.7 bits (98), Expect = 6e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 60330 ATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACC 60389 || ||| | ||| | ||||| ||||||| ||||||| |||||| |||| || |||||| Sbjct 335121 ATCTACCGGGTGGAGAACCCCTTCGACTTCATGGAGAACATCTCTCTGGAGGGAAAGACC 335180 Query 60390 AACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 |||||||||||||||||||| || || || Sbjct 335181 AACTTCTTTGAGAAGCGGGTGGGCGAGTA 335209 >seq35 Length=1322159 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 59991 GCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTC 60050 ||||||||| ||||| || |||||||||||||| || || ||| || | ||||| Sbjct 415239 GCTTTTGCAGCTGTGGAGGGCATCTTCTTCTCTGGTTCATTTGCTGCCATCTATTGGCTA 415180 Query 60051 AAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAG 60110 || ||| | ||||| ||||| || |||| | |||||| |||||||| | |||| ||| Sbjct 415179 AAGAAGAGAGGCCTGATGCCTGGTCTGACCTACTCCAATGAGCTGATCAGCAGGGATGAG 415120 Query 60111 G 60111 | Sbjct 415119 G 415119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548484908533920