Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq755 210 2e-49
seq735 84.2 2e-11
seq35 84.2 2e-11
>seq755
Length=318311
Score = 210 bits (232), Expect = 2e-49
Identities = 475/705 (67%), Gaps = 18/705 (3%)
Strand=Plus/Minus
Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326
|||| || || |||||| | || || || ||||||||||| || || || ||| ||
Sbjct 111204 AAGTGGTTCACCCACGCCTCCCCGACTCTCTTCAACGCTGGAACCAACAGGCCACAGCTG 111145
Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386
|| |||||||||||| | || ||||| || ||| ||||| |||||||| || || ||
Sbjct 111144 TCCAGCTGCTTCCTGCTCGCCATGAAAGACGACAGCATCGAAGGCATCTATGACACTCTG 111085
Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGT------ATCCACTGC-TC 53439
||| ||||||||| ||||||||||| | | || || |||||| || |||| ||
Sbjct 111084 AAGCAGTGTGCCCTCATCTCCAAGTCGGCTGGAGGCATCGGTGTGGCGGTCAGCTGCATC 111025
Query 53440 GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGT 53499
| ||| ||| | || ||| || || || ||| | || | || ||||
Sbjct 111024 --AGATCCACAGGAA-GCTAC----ATCTCTGGTACCAATGGCAACTCCAACGGGCTCGT 110972
Query 53500 GCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG 53559
|| ||||| | || | |||||||||||| || |||||| |||||||||| ||| |
Sbjct 110971 CCCCATGCTGAGAGTTTACAACAACACGGCGCGTTACGTCGACCAGGGTGGCAACAAGAG 110912
Query 53560 CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGA 53619
|| | |||||||| ||| | |||||||||||| ||| | | || || |||||
Sbjct 110911 ACCCGGAGCCTTCGCCATGTACTTGGAGCCGTGGCACTTTGACGTGTTCGACTTCCTCGA 110852
Query 53620 GCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGT 53678
|||| ||| || | || ||| | | | | ||||| || ||| || || |
Sbjct 110851 GCTGAAGAAGAACACAGGAAAGGAGGAGCAGAGGGCCAGAGACCTTTTCTAC-GCCCTTT 110793
Query 53679 GGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCC 53738
|||| || || || |||||| | | |||||||| || |||| |||| |||||||| |
Sbjct 110792 GGATCCCCGATCTGTTCATGAAGAGGGTGGAGAGCAACCAGGACTGGTCTCTGATGTGTC 110733
Query 53739 CGAACGAGTGCCCCGGCCTCCA-GGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGG 53797
| |||| || || || || | | ||| || || ||||||||| | ||| | ||
Sbjct 110732 CCAACGCCTGTCCTGGACTGGACGAGTG-CTGGGGGGAGGAGTTTGAGGAGCTCTACACC 110674
Query 53798 ACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATGCA 53857
| ||| | | || | |||| ||| ||||| | || | ||| | ||
Sbjct 110673 AGGTATGAGAAGGAAGGGAGGGCCAAGCGTGTGGTGAAGGCTCAGCAGCTGTGGTACGCC 110614
Query 53858 ATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAAC 53917
||| || || ||| ||||||||| |||||||||||| ||||| || | ||||
Sbjct 110613 ATCATCGAGTCGCAGACGGAGACGGGTACGCCGTACATGCTGTACAAAGACGCCTGCAAC 110554
Query 53918 GAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGCAAC 53962
||||||||||||| |||| | ||| |||||| | ||||||
Sbjct 110553 AGGAAGAGCAACCAGCAGAATCTGGGCACCATCAAGTGCAGCAAC 110509
>seq735
Length=345074
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| || || |||||||| ||||| ||||||||||| || |||| ||||||||||||||
Sbjct 335209 TACTCGCCCACCCGCTTCTCAAAGAAGTTGGTCTTTCCCTCCAGAGAGATGTTCTCCATG 335150
Query 74523 CAGTCGAAAGGGTTCT 74538
||||||| |||||||
Sbjct 335149 AAGTCGAAGGGGTTCT 335134
>seq35
Length=1322159
Score = 84.2 bits (92), Expect = 2e-11
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831
||||| ||||| |||| ||||| || | | || |||||||| || || | ||||||
Sbjct 415121 TCATCCCTGCTGATCAGCTCATTGGAGTAGGTCAGACCAGGCATCAGGCCTCTCTTCTTT 415180
Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891
| |||| |||||||| || |||||| |||||||||||| || ||| ||||| ||
Sbjct 415181 AGCCAATAGATGGCAGCAAATGAACCAGAGAAGAAGATGCCCTCCACAGCTGCAAAAGCC 415240
Query 74892 ACAA 74895
||||
Sbjct 415241 ACAA 415244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547176203716400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |