Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq755 221 1e-52
seq1721 178 1e-39
seq210 161 1e-34
>seq755
Length=318311
Score = 221 bits (244), Expect = 1e-52
Identities = 754/1150 (66%), Gaps = 60/1150 (5%)
Strand=Plus/Plus
Query 80540 CCCACATGTCGTGCTGCAAGATGCCCT--CCGACGCCGGAGACCCCGCGAACGTCTCGTA 80597
|||||||||||| ||||| |||||||| | ||| |||| ||| || ||||||||||
Sbjct 110076 CCCACATGTCGTACTGCAGGATGCCCTTGCTGACTGGGGAG--CCCTCGTACGTCTCGTA 110133
Query 80598 CGGGCC---CTCCGTCTTGGCCAGCTCACA---CGACTCCATAAGGGCCGCGTGATAAAT 80651
||||| ||| | || |||||||| || || ||||| | || |||| || ||
Sbjct 110134 GGGGCCGAACTCGG-CT--GCCAGCTCGCAGCTCGCCTCCAGA---GCAGCGTAGTAGAT 110187
Query 80652 GCACTCAAAGACGCCCTTGTTCACACCGC-GCGCCTGTGGGTCGTCGAACGACAAGCCCA 80710
| ||| |||| | |||| | | || | |||| ||| || |||| | ||
Sbjct 110188 GGTCTCGAAGATGTGGATGTTGAG-CAGCTGAGCCTCGGGGCTTTCAAACGGGTGACGCA 110246
Query 80711 TCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGT 80770
| | ||||| |||| || | || || || ||||| ||||||| | |||||||||||
Sbjct 110247 TGAGGATGAAGGCGTCTGCTAAACCTTGCACTCCGATTCCGATCGGCCTGTGGCGCTTGT 110306
Query 80771 TCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGC 80830
| || ||| || || || | |||||| |||| | ||||| | |||||||||
Sbjct 110307 TGGAATTCTCAGCTTCAGGCACTGGGTAGTAGTTGATGTCGATAATCTTGTTCAGGTT-- 110364
Query 80831 GTGTAACAACCCGT---GTAACATCATGAAGTTTCTGAAAGTCGAA--TTGGTTCCCCT- 80884
| | || | | || |||| ||||| | |||||| || | | |||
Sbjct 110365 -TTTGACGATTACTTTGGTGACATACGCCAGTTTTTTAAAGTCAAAAGTCCGCTCCGGGG 110423
Query 80885 TCAC--AAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCA--GCA 80940
| || | ||| | ||| | ||| |||||||| || || || ||||| ||| ||
Sbjct 110424 TGACGTACATGTTG--AGGGCGATGGAGGCCAGATTACAGACCGCTACCTCGTCATGGCT 110481
Query 80941 TCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTC 81000
|||| ||||||||||| ||||| | || |||| || || ||||| || | |
Sbjct 110482 GGTGTAT--TCGACGATTTCTGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGC 110539
Query 81001 TGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACC 81060
||||| ||| |||||| ||||| ||||| ||||||||| ||||| ||||| |
Sbjct 110540 TGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCCGTCTCCGTC 110599
Query 81061 TGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCAC---CTTGCGGAATTTG 81117
|| |||| || |||||||| ||| | || | ||||| ||||| ||| | |
Sbjct 110600 TGCGACTCGATGATGGCGTACCACAGCTGCTGAGCCTTCACCACACGCTT---GGCCCTC 110656
Query 81118 CCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAACT--TGGCACCGTGA--AGTTCAG 81172
||||| | ||||| ||| ||| ||| || || |||| | | || | || |||
Sbjct 110657 CCTTCCTTCTCATACCTGGTGTAGAGC-TCCTCAAACTCCTCCCCCCAGCACTCGTCCAG 110715
Query 81173 TGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCT 81232
| | || || |||| || |||||||| |||||| || | |||| || ||
Sbjct 110716 T----CCAGGACAGGCGTTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCT 110771
Query 81233 TCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCAT 81292
||||||| || |||||||| |||||| ||| ||||| | | | | |||||| |
Sbjct 110772 TCATGAACAGATCGGGGATCCAAAGGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCT 110831
Query 81293 CACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGAT 81352
|| ||| || |||||| ||||| | | ||| ||||| ||||||| |
Sbjct 110832 TTCCTGTGTTCTTCTTCAGCTCGAGGAAGTCGAACACGTCAAAGTGCCACGGCTCCAAGT 110891
Query 81353 ACACGGCGA----TC--GACCCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCG 81406
||| ||||| || | | |||| ||||||||||| ||||||||| || ||
Sbjct 110892 ACATGGCGAAGGCTCCGGGTCTCTTG---TTGCCACCCTGGTCGACGTAACGCGCCGTGT 110948
Query 81407 CGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATAC 81466
||| | || | || ||| |||| || || | || | || || ||||| |||
Sbjct 110949 TGTTGTAAACTCTCAGCATGGGGACGAGCCCGTTGGAGTTGCCATTGGTACCAGAGATGT 111008
Query 81467 GCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAA 81526
|| ||| | | ||||| | | ||||||||| || | | |||| || |
Sbjct 111009 AGCTTCCTGTGGATCTGATGCAGCTGACCGCCACACCGATGCCTCCAGCCGACTTGGAGA 111068
Query 81527 TCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAA 81586
| | |||||| | |||| || ||||| || || |||||||| || | ||||||| | |
Sbjct 111069 TGAGGGCACACTGCTTCAGAGTGTCATAGATGCCTTCGATGCTGTCGTCTTTCATGGCGA 111128
Query 81587 GCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCG 81646
||| ||| ||||| |||| ||| || || || | || || ||||| || || |||| |
Sbjct 111129 GCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTTCCAGCGTTGAAGAGAGTCGGGGAGG 111188
Query 81647 CGTGAATGAA 81656
|||| ||||
Sbjct 111189 CGTGGGTGAA 111198
>seq1721
Length=144067
Score = 178 bits (196), Expect = 1e-39
Identities = 170/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || || |||||||| || || |||||||| ||| | ||
Sbjct 118156 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 118215
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||||| || || || ||||||||||| ||||| || ||||||
Sbjct 118216 GACACCATTGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCCCCTGACCAG 118275
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || |||||||| ||||| || ||||||| || ||||| | ||||| ||
Sbjct 118276 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTCTCTGACTACAAC 118335
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623
||||||| |||||||| || || || || |||||||
Sbjct 118336 ATCCAAAAAGAATCCACCCTCCACCTTGTGCTGCGTCT 118373
Score = 159 bits (176), Expect = 4e-34
Identities = 166/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| || || || || |||||||| || || || ||||| ||| | ||
Sbjct 117928 ATGCAGATCTTTGTGAAAACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 117987
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||||||||||| ||||||||||| || ||||| || ||||||
Sbjct 117988 GACACCATCGAGAATGTCAAGGCTAAAATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 118047
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || || ||||| ||||| || || |||| || ||||| | ||||| ||
Sbjct 118048 CAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 118107
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623
|||| ||||| ||||| || || || ||| |||||||
Sbjct 118108 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCT 118145
>seq210
Length=679747
Score = 161 bits (178), Expect = 1e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| | || || ||||| || || || ||||| ||| | |
Sbjct 555533 ATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAGC 555592
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| |||| || || || |||||||| ||||| || ||||| ||||||
Sbjct 555593 GACACCATAGAGAATGTGAAAGCAAAGATCCAGGACAAAGAGGGGATCCCTCCTGACCAG 555652
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || |||||||||||||| || || |||| ||| ||||| | ||||| ||
Sbjct 555653 CAGAGGCTGATATTTGCTGGTAAGCAGCTGGAAGATGGTCGCACCCTCTCTGACTACAAC 555712
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || ||||| || ||||| ||| |||||||| | || ||
Sbjct 555713 ATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTCTTAGGGGAGG 555759
Score = 150 bits (166), Expect = 2e-31
Identities = 164/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || ||||||||||| || || || ||||| ||| | |
Sbjct 555761 ATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACACTGGAGGTGGAGCCCAGC 555820
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | || |||||||| |||||||| ||||| || ||||| ||||||
Sbjct 555821 GACACTATCGAGAACGTCAAAGCTAAAATCCAGGACAAAGAGGGGATCCCTCCTGACCAG 555880
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || ||||| |||||||| || || |||| ||| || || | ||||| ||
Sbjct 555881 CAGAGGCTGATCTTTGCCGGTAAGCAGCTGGAAGATGGTCGCACTCTCTCTGACTACAAC 555940
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623
|||| || || ||||| || || || || |||||||
Sbjct 555941 ATCCAGAAAGAGTCCACCCTCCACCTGGTGCTGCGTCT 555978
Score = 98.7 bits (108), Expect = 1e-15
Identities = 90/114 (79%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 27520 GACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGAC 27579
|||||||||||||| ||||| ||||||||||| || || |||| ||| ||||| | |||
Sbjct 556326 GACCAGCAGCGTCTGATTTTCGCTGGTAAGCAGCTGGAAGATGGTCGCACCCTCTCTGAC 556385
Query 27580 TATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|| || |||| || || ||||| || || || ||| ||||||| || || |||
Sbjct 556386 TACAACATCCAGAAAGAGTCCACCCTCCACCTGGTCCTGCGTCTCCGTGGAGGA 556439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570268924176160
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