Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq82 170 3e-37 >seq82 Length=938037 Score = 170 bits (188), Expect = 3e-37 Identities = 496/752 (66%), Gaps = 20/752 (3%) Strand=Plus/Minus Query 13695 TTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTCCTG 13754 |||||||| || ||||| || |||||||| | ||||| |||||||| ||||| || ||| Sbjct 67475 TTTCCCATTGCGTACTCAATGGTGATCCATGAGAAGATTGAGATGTTTGAGCGACTTCTG 67416 Query 13755 AGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTCCGGCGAC 13814 | || | ||||| || |||||| |||||||||| || |||||| |||||| | Sbjct 67415 CGAGCTGTGTACGCGCCCCAGAACGTCTACTGCGTACATGTGGACCAGAAGTCCTCTGCA 67356 Query 13815 GAGTTCATCCGGG-GC-GTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCCC 13872 ||||| || | || || ||||||| || ||||| ||||| ||| | ||| Sbjct 67355 GAGTT--TCAGAAAGCTGTGGCGGCCATTGCTTCATGCTTTCCTAATGTGTTTGTAGCCA 67298 Query 13873 ACCGGCT-GCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCTGC 13931 | | | | ||| |||||||||| ||| ||| | |||||||| || || | |||| Sbjct 67297 GCAAGTTAGAACGG-GTGGTGTACGCCTCGTGGTCCAGAGTGCAGGCAGATCTGAACTGC 67239 Query 13932 ATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGGATG 13991 ||| ||| ||| ||| || ||||| |||||||||||||| ||| ||||||| Sbjct 67238 ATGAAGGATCTGCTGCACTCTCCAGTCAACTGGAGGTACCTGCTGAACACCTGCGGGACA 67179 Query 13992 GACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCTGGGCGGCAAG 14051 |||||||| |||| || || ||||| || || ||||||||||| || ||| Sbjct 67178 GACTTCCCCATCAAAACAAATGGAGAGATGGTAAAAGCACTGAAGGCCCTCAATGGAAAG 67119 Query 14052 AACGCCCTGGAGAGCGAGGGCATGCCCA---ACCACAAGCTGCACCGCATCAGGAAGAGG 14108 ||| | ||||||| || | || ||| | ||||| ||| | || || Sbjct 67118 AACAGCATGGAGAGTGAAGTCA---CCAGTGAGTACAAGAAAACCCG---CTGGCAGTTT 67065 Query 14109 CACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACCGGCAGGAACAAGGCCCCGCCGCCG 14168 || | || | ||| | ||||| | | |||| | || ||||| Sbjct 67064 CATTACAACGTCACTGATGGC---CTCACAAACACATACGTGCACAAACCTCCCCCGCCC 67008 Query 14169 CTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCGGTCACCCGGGAGTTCGTGGAC 14228 |||| | |||||| || | ||||| || ||||||| |||||| | | || ||| | Sbjct 67007 ATCAGCAGCCCCATGTTCTCTGGAAATGCCTACTTTGTGGTCACAAGAGCCTTTGTGAAG 66948 Query 14229 TTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCATGCACTGGTTCGAGGACACGTACAGC 14288 ||| | |||||| | | | | || | ||| |||||||||||||| Sbjct 66947 CACGTGATGGAGGACGGAGAGATTCAAAAGTTTCTGGAGTGGGAGAAGGACACGTACAGC 66888 Query 14289 CCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGGGA-CGCCCGGGGGGATCCC 14347 || || |||||||||||||||||| ||||||| || | | | ||||| | || Sbjct 66887 CCTGATGAGCACCTGTGGGCCACCTTGCAGAGGAT-TCCTTCAGTTCCCGGATCTGTGCC 66829 Query 14348 CGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAAGGTCAGGTTCGTCAAGTGGCA 14407 | || |||||| |||| ||| |||||| |||| | | | | ||||||||| Sbjct 66828 TGCCAGCGACAAGTATGACATCTCAGACATGCAGGCCCTCGCCCGCGTGGTCAAGTGGAG 66769 Query 14408 CTACTACGAGGGGGATATCAAGAAAGGGGCCC 14439 ||| | || || ||||| | ||||| |||| Sbjct 66768 CTATTTAGAAGGAGATATGCAAAAAGGAGCCC 66737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658691293191680