Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq82 170 3e-37
>seq82
Length=938037
Score = 170 bits (188), Expect = 3e-37
Identities = 496/752 (66%), Gaps = 20/752 (3%)
Strand=Plus/Minus
Query 13695 TTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTCCTG 13754
|||||||| || ||||| || |||||||| | ||||| |||||||| ||||| || |||
Sbjct 67475 TTTCCCATTGCGTACTCAATGGTGATCCATGAGAAGATTGAGATGTTTGAGCGACTTCTG 67416
Query 13755 AGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTCCGGCGAC 13814
| || | ||||| || |||||| |||||||||| || |||||| |||||| |
Sbjct 67415 CGAGCTGTGTACGCGCCCCAGAACGTCTACTGCGTACATGTGGACCAGAAGTCCTCTGCA 67356
Query 13815 GAGTTCATCCGGG-GC-GTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCCC 13872
||||| || | || || ||||||| || ||||| ||||| ||| | |||
Sbjct 67355 GAGTT--TCAGAAAGCTGTGGCGGCCATTGCTTCATGCTTTCCTAATGTGTTTGTAGCCA 67298
Query 13873 ACCGGCT-GCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCTGC 13931
| | | | ||| |||||||||| ||| ||| | |||||||| || || | ||||
Sbjct 67297 GCAAGTTAGAACGG-GTGGTGTACGCCTCGTGGTCCAGAGTGCAGGCAGATCTGAACTGC 67239
Query 13932 ATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGGATG 13991
||| ||| ||| ||| || ||||| |||||||||||||| ||| |||||||
Sbjct 67238 ATGAAGGATCTGCTGCACTCTCCAGTCAACTGGAGGTACCTGCTGAACACCTGCGGGACA 67179
Query 13992 GACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCTGGGCGGCAAG 14051
|||||||| |||| || || ||||| || || ||||||||||| || |||
Sbjct 67178 GACTTCCCCATCAAAACAAATGGAGAGATGGTAAAAGCACTGAAGGCCCTCAATGGAAAG 67119
Query 14052 AACGCCCTGGAGAGCGAGGGCATGCCCA---ACCACAAGCTGCACCGCATCAGGAAGAGG 14108
||| | ||||||| || | || ||| | ||||| ||| | || ||
Sbjct 67118 AACAGCATGGAGAGTGAAGTCA---CCAGTGAGTACAAGAAAACCCG---CTGGCAGTTT 67065
Query 14109 CACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACCGGCAGGAACAAGGCCCCGCCGCCG 14168
|| | || | ||| | ||||| | | |||| | || |||||
Sbjct 67064 CATTACAACGTCACTGATGGC---CTCACAAACACATACGTGCACAAACCTCCCCCGCCC 67008
Query 14169 CTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCGGTCACCCGGGAGTTCGTGGAC 14228
|||| | |||||| || | ||||| || ||||||| |||||| | | || ||| |
Sbjct 67007 ATCAGCAGCCCCATGTTCTCTGGAAATGCCTACTTTGTGGTCACAAGAGCCTTTGTGAAG 66948
Query 14229 TTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCATGCACTGGTTCGAGGACACGTACAGC 14288
||| | |||||| | | | | || | ||| ||||||||||||||
Sbjct 66947 CACGTGATGGAGGACGGAGAGATTCAAAAGTTTCTGGAGTGGGAGAAGGACACGTACAGC 66888
Query 14289 CCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGGGA-CGCCCGGGGGGATCCC 14347
|| || |||||||||||||||||| ||||||| || | | | ||||| | ||
Sbjct 66887 CCTGATGAGCACCTGTGGGCCACCTTGCAGAGGAT-TCCTTCAGTTCCCGGATCTGTGCC 66829
Query 14348 CGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAAGGTCAGGTTCGTCAAGTGGCA 14407
| || |||||| |||| ||| |||||| |||| | | | | |||||||||
Sbjct 66828 TGCCAGCGACAAGTATGACATCTCAGACATGCAGGCCCTCGCCCGCGTGGTCAAGTGGAG 66769
Query 14408 CTACTACGAGGGGGATATCAAGAAAGGGGCCC 14439
||| | || || ||||| | ||||| ||||
Sbjct 66768 CTATTTAGAAGGAGATATGCAAAAAGGAGCCC 66737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658691293191680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |