Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq210 111 1e-19 seq1721 89.7 3e-13 >seq210 Length=679747 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || ||||||| ||||| ||||| ||| ||| || || ||||| || || || Sbjct 555988 GCCTCCCCTCAGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 555929 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | ||||| || || ||||||||||| || | | ||| ||||| || || Sbjct 555928 GAGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCAGGAGG 555869 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||| ||||| ||| ||| | ||| ||| | || ||||| | ||||| Sbjct 555868 GATCCCCTCTTTGTCCTGGAT-TTTAGCTTTGACGTTCTCGATAGTGTCGCTGGGCTCCA 555810 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||| || || || || ||||| | || |||||||| ||||||||| Sbjct 555809 CCTCCAGTGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATG 555760 >seq1721 Length=144067 Score = 89.7 bits (98), Expect = 3e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| || ||||||| || | ||||| ||| |||||| || ||||| || || || Sbjct 118154 CCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 118095 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| || || || || || || || || | ||| ||||| || || Sbjct 118094 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGA 118035 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| ||| ||| | || || | || ||||| | ||| || Sbjct 118034 ATGCCTTCCTTGTCCTGGAT-TTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCGAC 117976 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || | ||| || || || || || | ||||||||||| ||||||||||| Sbjct 117975 CTCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCATGTT 117925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314707283507594