Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1310 123 2e-23 >seq1310 Length=240470 Score = 123 bits (136), Expect = 2e-23 Identities = 124/161 (77%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 || || || || ||||| || || || |||||| | |||||||| |||||||| | Sbjct 118327 GACCTGCCCCTCATGGCTCTGCCGCCCTGCCACGCTCTCTGCCAGTTCTACGTGTGTGAC 118386 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || |||||||| || ||||| || || || ||||| || ||||| | || ||||||||| Sbjct 118387 GGTGAGCTGTCGTGTCAGCTGTACCAGCGCTCGGGTGATATGGGTCTGGGAGTGCCGTTC 118446 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || || || || ||||| |||||||||||||| Sbjct 118447 AACATCGCCAGCTATGCGCTCCTCACCTACATGATCGCTCA 118487 Score = 123 bits (136), Expect = 2e-23 Identities = 124/161 (77%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 |||||||||||||| ||||| || || || || || |||||||||||||| || | ||| Sbjct 118487 TGAGCGATCATGTAGGTGAGGAGCGCATAGCTGGCGATGTTGAACGGCACTCCCAGACCC 118428 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 || || ||||| || || || ||||| || |||||||| || | |||||||| ||| Sbjct 118427 ATATCACCCGAGCGCTGGTACAGCTGACACGACAGCTCACCGTCACACACGTAGAACTGG 118368 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 ||||| | |||||| || || || ||||| || || || || Sbjct 118367 CAGAGAGCGTGGCAGGGCGGCAGAGCCATGAGGGGCAGGTC 118327 Score = 109 bits (120), Expect = 5e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381 || ||||| |||||||| || |||| || || ||||| ||||||| | |||||| || Sbjct 116700 GGAGTGAAAATCTGGGATGCCAACGGTTCCCGGGACTTCTTGGACAACCTCGGGTTCACA 116759 Query 34382 TCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCG 34441 || |||||||||||| |||| || || ||||| ||||||||||| |||||||| || Sbjct 116760 GAGCGAGAGGAGGGCGACCTGGGGCCTGTGTACGGCTTCCAGTGGAGGCACTTTGGTGCA 116819 Query 34442 GAGTA 34446 ||||| Sbjct 116820 GAGTA 116824 Score = 109 bits (120), Expect = 5e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 ||||| || |||||||| ||||||||||| ||||| || || |||| |||||||||||| Sbjct 116824 TACTCTGCACCAAAGTGCCTCCACTGGAAGCCGTACACAGGCCCCAGGTCGCCCTCCTCT 116765 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 || || |||||| | ||||||| ||||| || || |||| || |||||||| ||| Sbjct 116764 CGCTCTGTGAACCCGAGGTTGTCCAAGAAGTCCCGGGAACCGTTGGCATCCCAGATTTTC 116705 Query 7019 ACCCC 7023 || || Sbjct 116704 ACTCC 116700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448229800116960