Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq1310 123 2e-23
>seq1310
Length=240470
Score = 123 bits (136), Expect = 2e-23
Identities = 124/161 (77%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
|| || || || ||||| || || || |||||| | |||||||| |||||||| |
Sbjct 118327 GACCTGCCCCTCATGGCTCTGCCGCCCTGCCACGCTCTCTGCCAGTTCTACGTGTGTGAC 118386
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|| |||||||| || ||||| || || || ||||| || ||||| | || |||||||||
Sbjct 118387 GGTGAGCTGTCGTGTCAGCTGTACCAGCGCTCGGGTGATATGGGTCTGGGAGTGCCGTTC 118446
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
||||| || || || || || ||||| ||||||||||||||
Sbjct 118447 AACATCGCCAGCTATGCGCTCCTCACCTACATGATCGCTCA 118487
Score = 123 bits (136), Expect = 2e-23
Identities = 124/161 (77%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|||||||||||||| ||||| || || || || || |||||||||||||| || | |||
Sbjct 118487 TGAGCGATCATGTAGGTGAGGAGCGCATAGCTGGCGATGTTGAACGGCACTCCCAGACCC 118428
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
|| || ||||| || || || ||||| || |||||||| || | |||||||| |||
Sbjct 118427 ATATCACCCGAGCGCTGGTACAGCTGACACGACAGCTCACCGTCACACACGTAGAACTGG 118368
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
||||| | |||||| || || || ||||| || || || ||
Sbjct 118367 CAGAGAGCGTGGCAGGGCGGCAGAGCCATGAGGGGCAGGTC 118327
Score = 109 bits (120), Expect = 5e-19
Identities = 99/125 (79%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381
|| ||||| |||||||| || |||| || || ||||| ||||||| | |||||| ||
Sbjct 116700 GGAGTGAAAATCTGGGATGCCAACGGTTCCCGGGACTTCTTGGACAACCTCGGGTTCACA 116759
Query 34382 TCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCG 34441
|| |||||||||||| |||| || || ||||| ||||||||||| |||||||| ||
Sbjct 116760 GAGCGAGAGGAGGGCGACCTGGGGCCTGTGTACGGCTTCCAGTGGAGGCACTTTGGTGCA 116819
Query 34442 GAGTA 34446
|||||
Sbjct 116820 GAGTA 116824
Score = 109 bits (120), Expect = 5e-19
Identities = 99/125 (79%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
||||| || |||||||| ||||||||||| ||||| || || |||| ||||||||||||
Sbjct 116824 TACTCTGCACCAAAGTGCCTCCACTGGAAGCCGTACACAGGCCCCAGGTCGCCCTCCTCT 116765
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
|| || |||||| | ||||||| ||||| || || |||| || |||||||| |||
Sbjct 116764 CGCTCTGTGAACCCGAGGTTGTCCAAGAAGTCCCGGGAACCGTTGGCATCCCAGATTTTC 116705
Query 7019 ACCCC 7023
|| ||
Sbjct 116704 ACTCC 116700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448229800116960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |