Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1721 98.7 7e-16
seq210 98.7 7e-16
>seq1721
Length=144067
Score = 98.7 bits (108), Expect = 7e-16
Identities = 144/201 (72%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||| || || ||||||||||| || || || ||||| ||||| || || ||
Sbjct 117925 AACATGCAGATCTTTGTGAAAACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGCCC 117984
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| | || ||| | || | ||||| ||||| ||||| | || || ||
Sbjct 117985 AGTGACACCATCGAGAATGTCAAGGC-TAAAATCCAGGACAAGGAAGGCATTCCCCCTGA 118043
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| ||| | || || || || ||||| || |||||||| | ||||| | ||| ||
Sbjct 118044 CCAGCAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTA 118103
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || || ||||||||
Sbjct 118104 CAACATCCAGAAGGAGTCCAC 118124
>seq210
Length=679747
Score = 98.7 bits (108), Expect = 7e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || |||||||| || || || ||||| || || || || |||
Sbjct 555761 ATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACACTGGAGGTGGAGCCCAGC 555820
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| | || | | ||| ||||| |||||||| || | || || || ||
Sbjct 555821 GACACTATCGAGAACGTCAAAGCTAAAATCCAGGACAAAGAGGGGATCCCTCCTGACCAG 555880
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | | || |||||||| || || |||||||| | |||||| | || ||||||
Sbjct 555881 CAGAGGCTGATCTTTGCCGGTAAGCAGCTGGAAGATGGTCGCACTCTCTCTGACTACAAC 555940
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || |||||||||||
Sbjct 555941 ATCCAGAAAGAGTCCAC 555957
Score = 86.0 bits (94), Expect = 4e-12
Identities = 141/201 (70%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||| || || || ||| | || || || || ||||| || || || || ||
Sbjct 555530 AAGATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAGGTGGAGCCC 555589
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| | || ||| | ||| |||| | | |||||||| || | || || ||
Sbjct 555590 AGCGACACCATAGAGAATGTGAAAGCAAAGA-TCCAGGACAAAGAGGGGATCCCTCCTGA 555648
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| ||| | | |||||||| || || || |||||||| | ||||| | || ||
Sbjct 555649 CCAGCAGAGGCTGATATTTGCTGGTAAGCAGCTGGAAGATGGTCGCACCCTCTCTGACTA 555708
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || |||||||||||
Sbjct 555709 CAACATCCAGAAAGAGTCCAC 555729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337985632795544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |