Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1721 141 2e-28
seq755 84.2 5e-11
>seq1721
Length=144067
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
||| ||||||||||| |||||||||||||||| ||||| || | | || | |||||
Sbjct 118368 CAGCACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 118309
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
|| |||||||| ||||| |||||||| | || ||||| || ||||| || ||||||||
Sbjct 118308 CTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTC 118249
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||||||| ||| ||| || |||||||| || || || || | ||||| ||
Sbjct 118248 TTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGT 118189
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||| || | || || | ||| | |||||
Sbjct 118188 CTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 118156
Score = 138 bits (152), Expect = 3e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
||||||||||||||| ||||| || || |||| ||||| |||| | || | |||||
Sbjct 118140 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 118081
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| |||||||| ||||||||||| | | || ||||| || ||||| |||||||||||
Sbjct 118080 TTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTC 118021
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||| || ||| ||| ||||||||||| || || || || | ||||| ||
Sbjct 118020 CTGGATTTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGT 117961
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|||||| || | ||||| | || | ||||| ||
Sbjct 117960 CTTGCCAGTGAGGGTTTTCACAAAGATCTGCATGTT 117925
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
||||||||||||||||||||| || || |||| ||||| || | | || | |||||
Sbjct 118596 CAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 118537
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
|| |||||||| ||||||||||| | | || ||||| || ||||| |||||||||||
Sbjct 118536 CTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATTCCTTCCTTGTC 118477
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||||||| ||| ||| ||||||||||| || || || || | ||||| ||
Sbjct 118476 TTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGT 118417
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| || || | || || | ||| | |||||
Sbjct 118416 CTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 118384
Score = 95.1 bits (104), Expect = 3e-14
Identities = 93/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
||| ||||||||||| ||||| || || |||| ||||| |||| | || | |||||
Sbjct 109109 CAGCACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 109050
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
|| |||||||| ||||||||||| | | || ||||| || ||||| |||||||||||
Sbjct 109049 CTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTC 108990
>seq755
Length=318311
Score = 84.2 bits (92), Expect = 5e-11
Identities = 188/280 (67%), Gaps = 2/280 (1%)
Strand=Plus/Plus
Query 193502 CTGGTTGTTCTTTCGACAGATGGCGTCTTTGTAGACGATGAAGGGCATGCCCACCTCCGC 193561
||||||| |||| | | |||||||||||| | ||| | ||| | ||| |||||
Sbjct 110539 CTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCCGTCTCCGT 110598
Query 193562 TTGAGCGACGAGAATGTGATGCCAAAGTTCTTGAGCTTTCACTGT-CGTTCTGGCCTTTC 193620
|| | ||| ||| | ||| || | ||||| ||||| || | ||||| | |
Sbjct 110599 CTGCGACTCGATGATGGCGTACCACAGCTGCTGAGCCTTCACCACACGCT-TGGCCCTCC 110657
Query 193621 CTTCCCTCTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGAC 193680
||||| |||| ||| | ||| || |||||||| || | || || ||||| || |
Sbjct 110658 CTTCCTTCTCATACCTGGTGTAGAGCTCCTCAAACTCCTCCCCCCAGCACTCGTCCAGTC 110717
Query 193681 CGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTTCATGA 193740
| ||| | || || || | ||| ||| || | || ||||||||||||||||
Sbjct 110718 CAGGACAGGCGTTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGA 110777
Query 193741 AGAGGTCAGATGTCCAAATGGCGTAGAAAAGTTGTCTCGC 193780
| || || | |||||| |||||||||||| | ||| ||
Sbjct 110778 ACAGATCGGGGATCCAAAGGGCGTAGAAAAGGTCTCTGGC 110817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192442304997692
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |