Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq1310 138 9e-28
seq1782 104 2e-17
seq1613 104 2e-17
>seq1310
Length=240470
Score = 138 bits (152), Expect = 9e-28
Identities = 129/164 (79%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773
|| || || | |||||| |||||||| |||||||| | |||||||||||||| || |||
Sbjct 118499 AGTCCTGTAATGTGAGCGATCATGTAGGTGAGGAGCGCATAGCTGGCGATGTTGAACGGC 118440
Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833
|| || || ||||| || || || | |||||| ||||| ||||| ||||| ||||| | |
Sbjct 118439 ACTCCCAGACCCATATCACCCGAGCGCTGGTACAGCTGACACGACAGCTCACCGTCACAC 118380
Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAG 29877
||||| ||||| || | || ||||| || || || ||||||||
Sbjct 118379 ACGTAGAACTGGCAGAGAGCGTGGCAGGGCGGCAGAGCCATGAG 118336
Score = 113 bits (124), Expect = 4e-20
Identities = 130/172 (76%), Gaps = 10/172 (6%)
Strand=Plus/Minus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTC---G 30073
|| |||||||||||||| |||||||| || |||||||| ||||| || | |||| |
Sbjct 116812 AAGTGCCTCCACTGGAAGCCGTACACAGGCCCCAGGTCGCCCTCCTCTC---GCTCTGTG 116756
Query 30074 AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTC 30133
|| || |||||||| ||||| | |||||||||||| |||||||| || || || |||
Sbjct 116755 AACCCGAGGTTGTCCAAGAAGTCCCGGGAACCGTTGGCATCCCAGATTTTCACTCCTTTC 116696
Query 30134 TCGGAGAGCT-CTTTGGAGTTTGTGGACCCTCTGA---CGAACCACAGCAGC 30181
|| || || | ||||| | || || ||||| ||| |||| ||| ||||
Sbjct 116695 TCTGACAGTTCCTTTGCATTTGTTGAACCCTGTGATGTAGAACAACATCAGC 116644
>seq1782
Length=134307
Score = 104 bits (114), Expect = 2e-17
Identities = 77/90 (86%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 114443 AGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACGCT 114502
|||| ||||||||||| ||||| | ||||||||| || ||||||| ||| |||||| ||
Sbjct 1878 AGTCGAACCGGATGCCATGGCAGGTGTCCGTTGTTGCCCATGCCCAGGTCGGGACACACT 1819
Query 114503 GCCACGATACCGTTCAGAATGAGGGGCATG 114532
|||||||| |||||||||||| ||| ||||
Sbjct 1818 GCCACGATCCCGTTCAGAATGCGGGACATG 1789
Score = 100 bits (110), Expect = 2e-16
Identities = 84/103 (82%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348
||| ||||||||||| | ||| | ||||| |||| |||||| || || || ||||| ||
Sbjct 3752 CTCTCTGCTGAGGACGATGTTGATCCTGTTGCTCAAAGGTCTGTTTTTCTCTGGGATAGA 3693
Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
|||||| ||||| || ||||| |||||||| |||||||| |||
Sbjct 3692 GAACCATGTCTTCCTGCCCATGATCACCACATTCTGCTTGCCT 3650
>seq1613
Length=182461
Score = 104 bits (114), Expect = 2e-17
Identities = 77/90 (86%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 114443 AGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACGCT 114502
|||| ||||||||||| ||||| | ||||||||| || ||||||| ||| |||||| ||
Sbjct 170660 AGTCGAACCGGATGCCATGGCAGGTGTCCGTTGTTGCCCATGCCCAGGTCGGGACACACT 170601
Query 114503 GCCACGATACCGTTCAGAATGAGGGGCATG 114532
|||||||| |||||||||||| ||| ||||
Sbjct 170600 GCCACGATCCCGTTCAGAATGCGGGACATG 170571
Score = 100 bits (110), Expect = 2e-16
Identities = 84/103 (82%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348
||| ||||||||||| | ||| | ||||| |||| |||||| || || || ||||| ||
Sbjct 172534 CTCTCTGCTGAGGACGATGTTGATCCTGTTGCTCAAAGGTCTGTTTTTCTCTGGGATAGA 172475
Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
|||||| ||||| || ||||| |||||||| |||||||| |||
Sbjct 172474 GAACCATGTCTTCCTGCCCATGATCACCACATTCTGCTTGCCT 172432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406134400236748
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |