Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 156 3e-33
seq1310 147 2e-30
>seq1047
Length=257186
Score = 156 bits (172), Expect = 3e-33
Identities = 181/244 (74%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 69074 GGTGAACGGATGGGGAAAGTTTTATATCCCCACCGCCGTGACGATGCAGGTCATCGGTTA 69133
||||||||| ||||||||||| || | |||| |||| |||||||| | |||
Sbjct 166415 GGTGAACGGTTGGGGAAAGTTCTACCTTCCCAAGATAGTGAACATGCAGGTTGTAGGTGT 166474
Query 69134 TGTGACGGGAACTCCATACCAATGTGACCAGCTTGTCCTGATGACCTGCGAGGACCAGAA 69193
||| |||||| ||| || |||||||||||||| |||||||| || |||||| | ||
Sbjct 166475 GGTGGAGGGAACGTCATGTCACTGTGACCAGCTTGTTCTGATGACATGTGAGGACAAAAA 166534
Query 69194 GGTGTACGGCTATGACGGAGACGAGCTGCATGTGGTGGCTAACTGTCTGGATCAGATGGG 69253
| |||||| ||| || ||||| ||||||||| |||||||| | ||||| | | ||
Sbjct 166535 GCTGTACGCCTACGATGGAGAGGAGCTGCATCTGGTGGCTTCAAGCCTGGAGCGACTTGG 166594
Query 69254 GGAAGAAGGAATAGCCTATCCTGCATTCCAGAGCTATTATCATGGGGAGGCCTTCAAACA 69313
|| | | ||||| ||||| |||| | ||||||| || | |||||||||||| | |
Sbjct 166595 TGACAAGGAAATAGAATATCCAGCATCCAAGAGCTACTACAACGGGGAGGCCTTCGATGA 166654
Query 69314 TATG 69317
||||
Sbjct 166655 TATG 166658
Score = 131 bits (144), Expect = 1e-25
Identities = 153/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 69111 GTGACGATGCAGGTCATCGGTTATGTGACGGGAACTCCATACCAATGTGACCAGCTTGTC 69170
|||| | |||||| | ||| ||| |||||| ||| ||| ||||||||||||||
Sbjct 176071 GTGAACAGGCAGGTTGTAGGTGTGGTGGAGGGAACGTCATGCCACTGTGACCAGCTTGTT 176130
Query 69171 CTGATGACCTGCGAGGACCAGAAGGTGTACGGCTATGACGGAGACGAGCTGCATGTGGTG 69230
|||||||| || |||||| | ||| |||||| ||| || ||||| ||||||||| |||||
Sbjct 176131 CTGATGACATGTGAGGACAAAAAGCTGTACGCCTACGATGGAGAGGAGCTGCATCTGGTG 176190
Query 69231 GCTAACTGTCTGGATCAGATGGGGGAAGAAGGAATAGCCTATCCTGCATTCCAGAGCTAT 69290
|| | ||||| | | || || | | ||||| ||||| |||| | |||||||
Sbjct 176191 GCGTCAAGCCTGGAGCGACTTGGTGACAAGGAAATAGAATATCCAGCATCCAAGAGCTAC 176250
Query 69291 TATCATGGGGAGGCCTTCAAACATATG 69317
|| | |||||||||||| | |||||
Sbjct 176251 TACAACGGGGAGGCCTTCGATGATATG 176277
Score = 113 bits (124), Expect = 3e-20
Identities = 173/247 (70%), Gaps = 11/247 (4%)
Strand=Plus/Plus
Query 69072 GTGGTGAACGGATGGGGAAAGTTTTATATCCCCACCGCCGTGACGATGCAGGTCATCGGT 69131
||||||||||| ||||| ||||| || ||||| | || || |||||||| | |||
Sbjct 156118 GTGGTGAACGGGTGGGGGAAGTTCTACCTCCCCGAGACAGTAACCATGCAGGTTGTAGGT 156177
Query 69132 TATGTGACGGGAACTCCATACCAATGTGACCAGCTTGTCCTGATGACCTGCGAGGACCAG 69191
|| ||| || || |||| ||||||||||| || |||||| |||| || ||| |
Sbjct 156178 GTGGTTGAGGGCACACCGTACCCGTGTGACCAGCTAGTTCTGATGGCCTGTGATGACAAT 156237
Query 69192 AAGGTGTACGGCTATGACGGAGACGAGCTGCATGTGGTGGCTAACTGTCTGGA-TCAGAT 69250
| |||| |||||| ||||| ||||||||| | |||||| | || || || |||
Sbjct 156238 CGTTTTTACGCCTATGATGGAGAGGAGCTGCATCTTGTGGCTTCAAGCCTAGAGTCTGAT 156297
Query 69251 GGGGGAAGAAGGAATAGCCTATCCTGCATTCCAGAGCTATTATCATGGGGAGGCCTTCAA 69310
||||||| | ||| |||| |||||| ||| | ||||||||||||||
Sbjct 156298 ----------GGAATAGAGTTTCCAGCATCAAAGAGCTTTTACAAGGGGGAGGCCTTCAA 156347
Query 69311 ACATATG 69317
| | |||
Sbjct 156348 AGACATG 156354
Score = 87.8 bits (96), Expect = 1e-12
Identities = 101/135 (75%), Gaps = 1/135 (1%)
Strand=Plus/Plus
Query 69317 GACCAAGGAGGACTGGGAGAAGGTGAGGCAGAGCCCTGCGGGAAAAAGGTTGGATGAGGA 69376
||| ||||||||||||| |||||||| | |||||| ||| | |||||||| | ||
Sbjct 156457 GACTAAGGAGGACTGGGCTGAGGTGAGGAAAGGCCCTGTGGGCAGGAGGTTGGACCAAGA 156516
Query 69377 GCATCATAAACTGGTGGTGTCTCAAAAATCTGCACTGCTGAGGAATCTCAGAATCAGCAG 69436
|||||| ||| ||||| | ||||| ||| |||| ||||||||||||| |||
Sbjct 156517 GCATCAGAAATTGGTGAAAGCAACTAAATCCAGACTCCTGAAGAATCTCAGAATCGGCAA 156576
Query 69437 ACA-AAATAGAGGTA 69450
| | ||| |||||||
Sbjct 156577 AGAGAAACAGAGGTA 156591
>seq1310
Length=240470
Score = 147 bits (162), Expect = 2e-30
Identities = 137/174 (79%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267
|| || || | |||||| |||||||| |||||||| | |||||||||||||| || ||
Sbjct 118499 AGTCCTGTAATGTGAGCGATCATGTAGGTGAGGAGCGCATAGCTGGCGATGTTGAACGGC 118440
Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327
|| || || ||||| || ||||| | |||||| ||||||||||| ||||| || || |
Sbjct 118439 ACTCCCAGACCCATATCACCCGAGCGCTGGTACAGCTGACACGACAGCTCACCGTCACAC 118380
Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCT 27381
||||| ||||| || | |||||||| || || |||||||||||| || ||||
Sbjct 118379 ACGTAGAACTGGCAGAGAGCGTGGCAGGGCGGCAGAGCCATGAGGGGCAGGTCT 118326
Score = 125 bits (138), Expect = 5e-24
Identities = 146/194 (75%), Gaps = 10/194 (5%)
Strand=Plus/Minus
Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548
||||| |||||||||| || || |||||||| ||||| |||||||| || ||||||||
Sbjct 116834 CATGTTTTTGTACTCTGCACCAAAGTGCCTCCACTGGAAGCCGTACACAGGCCCCAGGTC 116775
Query 27549 TCCCTCTTCCCTGTGCTC---GAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGC 27605
||||| || | |||| ||| || |||||||| ||||| | ||||||||||||
Sbjct 116774 GCCCTCCTCTC---GCTCTGTGAACCCGAGGTTGTCCAAGAAGTCCCGGGAACCGTTGGC 116718
Query 27606 GTCCCAGATCTTTACCCCCTTCTCGGAGAGCT-CTTTGGAGTTTGTGGACCCTCTGA--- 27661
|||||||| || || || ||||| || || | ||||| | || || ||||| |||
Sbjct 116717 ATCCCAGATTTTCACTCCTTTCTCTGACAGTTCCTTTGCATTTGTTGAACCCTGTGATGT 116658
Query 27662 CGAACCACAGCAGC 27675
|||| ||| ||||
Sbjct 116657 AGAACAACATCAGC 116644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369480999399158
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |