Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq755 448 7e-121 seq1980 111 2e-19 >seq755 Length=318311 Score = 448 bits (496), Expect = 7e-121 Identities = 1285/1965 (65%), Gaps = 31/1965 (2%) Strand=Plus/Plus Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120 ||||| || || || ||||||| ||||||||| | || | || || || || || Sbjct 109820 TTCTTCATCTCCTCGTTCCACAGCCCCCTCTCTGTCAGGTCTTTGAGCAGGTGGGGGTTG 109879 Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180 || || ||||| || || |||| || || || ||||| || || ||||| || | || Sbjct 109880 ACGATCTGAAACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCG 109939 Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAAT 77240 | || || ||||| |||| || || || || || || || ||||| || |||| || Sbjct 109940 ATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGCAGC 109999 Query 77241 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 77300 | || || || | || | | | ||| || || || || ||||| ||||| || Sbjct 110000 AGGCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGG 110059 Query 77301 TCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCA 77360 || | || ||||| | ||||| || || || || || || | || || Sbjct 110060 TCGGTCGGCGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACTGGGGAGCCC 110119 Query 77361 TTATATGTTTCATAAGGTCCT---TCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCT 77417 | || || || || || || || | | || || || || ||||| |||| || Sbjct 110120 TCGTACGTCTCGTAGGGGCCGAACTCGGCT---GCCAGCTCGCAGCTCGCCTCCAGAGCA 110176 Query 77418 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAAC 77477 |||| || || || ||||| || | | ||||| || || || || |||||| Sbjct 110177 GCGTAGTAGATGGTCTCGAAGATGTGGATGTTGAGCAGCTGAGCCTCGGGGCTTTCAAAC 110236 Query 77478 GGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTA 77537 || | | | | || || ||||| |||||||| || || ||||| || || || || || Sbjct 110237 GGGTGACGCATGAGGATGAAGGCGTCTGCTAAACCTTGCACTCCGATTCCGATCGGCCTG 110296 Query 77538 TGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTA 77597 || | ||| |||||| | | |||||| || | || || || || ||||| ||||| || Sbjct 110297 TGGCGCTTGTTGGAATTCTCAGCTTCAGGCACTGGGTAGTAGTTGATGTCGATAATCTTG 110356 Query 77598 TTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCA 77657 || || ||| | || | |||||| || | | ||||| ||| ||||| | | Sbjct 110357 TTCAGGTTTTTGACGATTACTTTGGTGACATACGCCAGTTTTTTAAAGTCAAAAGTCCGC 110416 Query 77658 TCTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTA 77714 || | || ||||||| | || || || || |||||||| || |||||||| | | Sbjct 110417 TCCGGGGTGACGTACATGTTGAGGGCGATGGAGGCCAGATTACAGACCGCTACCTCGTCA 110476 Query 77715 GCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTT 77774 | ||| |||| | || || || || || || || || ||||| ||||||||||| Sbjct 110477 TGGCTGGTGTATTCGACGATTTCTGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGATTC 110536 Query 77775 TGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCA 77834 || ||||||||||| | ||||| | ||| || || || || |||| || || || || Sbjct 110537 TGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCCGTCTCC 110596 Query 77835 ATCTGTGATTCGATAATAGATTTCCAGA-CGACTCTAGCTTTTATCATAGATTTGTATCG 77893 |||| || ||||| || | | ||| | | || ||| || | || | ||| | Sbjct 110597 GTCTGCGACTCGATGATGGCGTACCACAGCTGCT-GAGCCTTCACCACACGCTTGGCCCT 110655 Query 77894 CCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAA 77953 || || | ||||| || || ||| ||||| || || ||||| || |||| Sbjct 110656 CCCTTCCTTCTCATACCTGGTGTAGAGCTCCTCAAACTCCTCCCCCCAGCACTCGTCCAG 110715 Query 77954 TCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCAT 78013 |||||| || | || || ||||||| |||||||| | || || | ||||| Sbjct 110716 TCCAGGACAGGCGTTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCAT 110775 Query 78014 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCC 78073 || ||||| || ||||| || || || || |||| || || || || || ||||| Sbjct 110776 GAACAGATCGGGGATCCAAAGGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCC 110835 Query 78074 TGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 78133 ||| ||||| || || ||||| || || | | ||| | ||||| || || | || || Sbjct 110836 TGTGTTCTTCTTCAGCTCGAGGAAGTCGAACACGTCAAAGTGCCACGGCTCCAAGTACAT 110895 Query 78134 TGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATA 78193 || | |||| |||| || || || ||||| || | || | || ||||| || || Sbjct 110896 GGCGAAGGCTCCGGGTCTCTTGTTGCCACCCTGGTCGACGTAACGCGCCGTGTTGTTGTA 110955 Query 78194 AACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCC 78253 |||||||| ||| || | | ||||| || | ||||| || ||||| || || ||||| Sbjct 110956 AACTCTCAGCATGGGGACGAGCCCGTTGGAGTTGCCATTGGTACCAGAGATGTAGCTTCC 111015 Query 78254 ACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGC 78313 | | | || || | | | || || ||||| ||| ||| || || || || Sbjct 111016 TGTGGATCTGATGCAGCTGACCGCCACACCGATGCCTCCAGCCGACTTGGAGATGAGGGC 111075 Query 78314 GCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAA 78373 || | |||| || || ||||| || || || ||||| || ||||| || || || Sbjct 111076 ACACTGCTTCAGAGTGTCATAGATGCCTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAA 111135 Query 78374 ACAGCTAGACATTTG----ATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCAT 78429 ||||| |||| || || || ||||| || || || | ||||| || || | Sbjct 111136 GCAGCTGGACAGCTGTGGCCTGTTG----GTTCCAGCGTTGAAGAGAGTCGGGGAGGCGT 111191 Query 78430 GCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATT 78489 | || ||||| || || || || || ||||| || || || |||| || |||||| || Sbjct 111192 GGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTCTCGATGGCTGCATCGATGTCCGTTT 111251 Query 78490 GATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTAT 78549 || |||||||| | || | ||| | ||| ||||| || | || || || | Sbjct 111252 TGTGGATTCCTACGGACACCCTCATGAGCATGTGCTGCGGACGCTCGGCCACTTTGCCGT 111311 Query 78550 TTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 78609 | || ||||||| || || |||| ||| || || || || ||||||| || || | Sbjct 111312 TGATCTTCAACAGATAGGAGCGCTCCAGAGTCTTGAAGCCGAAGAAGTTGTAGGAGAAAT 111371 Query 78610 CTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCATGA 78669 |||| ||| | || || | || || || ||||||| | |||||| || || Sbjct 111372 CTCTGTCGAAGATTATGGCCGAGTTGAGGCGGTCTTTGTTCTCAAGAACAATGTC---GA 111428 Query 78670 CAGT---AGTTGAAATAATAGGAGATCGTACACCATTTTTA--GGATTAACATAGTTAAA 78724 || |||| || || || || || | || | || || || ||||| | Sbjct 111429 GCGTCTCCTTTGAGATCATGGGGGA--GTGGCGTTTGTTCAAGGGGTTGACGTAGTTGTA 111486 Query 78725 TAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGC 78784 | || ||||| || || || || | ||| || || |||||||| || ||||| ||||| Sbjct 111487 CAGGTCCTCCATGACGTCGCTGAACACTTTCTTGGTCTCCTTGTGCAGGTTAGAGACAGC 111546 Query 78785 TATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTC 78844 || | ||||| || || || || || || |||| || || |||||| || || || Sbjct 111547 GATCCGAGCAGCGAGGATGGCGTAGTCGGGGTGTTTAGTTGTGAGAGTGGCAGCGATCTC 111606 Query 78845 TGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTT 78904 ||| || || | || | ||| | ||| ||||| || | || | || || || || || Sbjct 111607 TGCAGCCAACGTGTCGAGCTCCACAGTGGTGACTCCGCTGTACAAACCCTGGATCACCTT 111666 Query 78905 CATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCT-AA 78963 ||||| || | | | || || ||||| |||| ||||| || || || || |||| | Sbjct 111667 CATGGTAATCTGGGCCGGGTCCACAAAGTCAGAGTTCAGCCCGTAGCA-AAGCTTCTGGA 111725 Query 78964 TACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCAT 79008 | ||||| |||||||| || || || || |||| || ||||| Sbjct 111726 TGCGAGAGGTGATTTTGTCGAACATGACGCGTTCCTGGCGTCCAT 111770 >seq1980 Length=102293 Score = 111 bits (122), Expect = 2e-19 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792 ||||| || || ||||| || ||||||| |||||||||||||| ||||||||||| | Sbjct 5484 ATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGATTTTGCTGGTTGCTCTTCCTG 5543 Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGAT 77848 ||||| | ||||||||| || || | || ||||||||||| ||||||| ||||| Sbjct 5544 TTGCAGGCGTCCTTATAGAGCATGTATGGTGTCCCGGTTTCTGTCTGTGACTCGAT 5599 Score = 89.7 bits (98), Expect = 7e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 78002 AACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATG 78061 ||| ||||||||||||||||| || ||||| || |||| || || |||| || ||| || Sbjct 5938 AACGCGTTTCATAAAGAGATCTGGGATCCACAGGGCAAAGAACAGGTCTCTGGCTCTCTG 5997 Query 78062 TTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 78121 ||||| || || || ||||| || | || | ||| || | | |||| |||||||||| Sbjct 5998 CTCTTCTTTACCGGTGTTCTTCTTCAACTCCAAAAAGTCAAACACATCAAAATGCCATGG 6057 Query 78122 TTCTAGATA 78130 || || || Sbjct 6058 CTCCAGGTA 6066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694618280211520