Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq210 147 2e-30
seq1721 134 1e-26
>seq210
Length=679747
Score = 147 bits (162), Expect = 2e-30
Identities = 174/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||||||||| || ||| ||| || ||||||||||| ||
Sbjct 555991 CATGCCTCCCCTCAGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTC 555932
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| ||||||||||||| | |||||| || |
Sbjct 555931 AGAGAGAGTGCGACCATCTTCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCAGG 555872
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
||| | || || || ||| || || |||| | |||| | || |||||| || |
Sbjct 555871 AGGGATCCCCTCTTTGTCCTGGAT-TTTAGCTTTGACGTTCTCGATAGTGTCGCTGGGCT 555813
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||||| || || ||||| || |||||||||||||| ||||| ||||||
Sbjct 555812 CCACCTCCAGTGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATG 555760
Score = 123 bits (136), Expect = 2e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || | || || || || || ||| ||| || ||||||||||| ||
Sbjct 555763 CATGCCTCCCCTAAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTC 555704
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| || ||||| |||| | |||||| || |
Sbjct 555703 AGAGAGGGTGCGACCATCTTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGGTCAGG 555644
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
||| | || || || ||| ||||| ||||| | ||| ||||||||||| || |
Sbjct 555643 AGGGATCCCCTCTTTGTCCTGGATCTT-TGCTTTCACATTCTCTATGGTGTCGCTGGGCT 555585
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||| || || ||||| || || | ||||||||| ||||| |||||
Sbjct 555584 CCACCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 555533
>seq1721
Length=144067
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| | || || ||||| || ||| |||||| ||||||||||| || | |
Sbjct 118610 CCACCCCTCAGACGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAG 118551
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || ||||||||||| || || |||||||| | |||||| || | ||
Sbjct 118550 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGA 118491
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| |||||||| || ||||| ||| | | | ||||||||| || || |||
Sbjct 118490 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCAACC 118431
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || || |||||||| ||||||||||| |||||||| |||||
Sbjct 118430 TCCAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 118384
Score = 125 bits (138), Expect = 5e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || || ||||| || ||| |||||| ||||||||||| ||
Sbjct 118158 CATACCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 118099
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| ||| | || ||||||||||| || || |||||||| | |||||| || |
Sbjct 118098 GGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGG 118039
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| || || ||| | | | |||||||| || ||
Sbjct 118038 GGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTC 117979
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| | || || ||||| || |||||||| ||||| ||||| ||||||
Sbjct 117978 GACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCATG 117927
Score = 114 bits (126), Expect = 9e-21
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||| ||||| || ||| || |||||||||||||| ||
Sbjct 118386 CATACCGCCCCTCAGACGCAGCACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTC 118327
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| || |||||||| | | |||||| || |
Sbjct 118326 AGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGG 118267
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| || ||||| ||| | | | |||||||| || ||
Sbjct 118266 GGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTC 118207
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| || ||||||||||| |||||||| |||||
Sbjct 118206 GACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 118156
Score = 93.3 bits (102), Expect = 3e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| | || ||| ||||| || ||| |||||| ||||||||||| |||| |
Sbjct 109123 CCACCCCTCAGACGCAGCACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAG 109064
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || ||||||||||| || || |||||||| | |||||| || | ||
Sbjct 109063 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGA 109004
Query 44231 ACACCTTCCTTTTC 44244
| |||||||| ||
Sbjct 109003 ATGCCTTCCTTGTC 108990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359964874205706
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |