Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq1056 150 3e-31 seq570 141 1e-28 seq286 111 2e-19 >seq1056 Length=264320 Score = 150 bits (166), Expect = 3e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 8345 GCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCC 8404 ||| | |||||||| ||| ||||||| || || ||||||||||||||||||||| || Sbjct 42842 GCGGTGTTGACGATGTTGAAGCCCACGTTGCCTCCAAAGGTGCTGGGCTTCCAGTACTCC 42783 Query 8405 GGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGA 8464 || ||||||||| || |||| | ||| ||||||||||| || ||||||| ||| | Sbjct 42782 GGAGAGCAGATGGGATTTCCCATTAAGCCCTTGAGGGAGAAAGGGGCCCCCATCTCCACC 42723 Query 8465 ATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGC 8524 || |||| || ||||||||||| | | ||| || ||||||| | || | ||| ||| Sbjct 42722 ATCGTCTCCCCAAAGATGGCGTTCTGCCTGGGTTTCTCCACCAGCAGGCCCGGGTAGAGC 42663 Query 8525 TCCACAGCCTCGACGTCTCCGTA 8547 ||||| || |||| || ||||| Sbjct 42662 TCCACGGCATCGATGTGGCCGTA 42640 Score = 131 bits (144), Expect = 2e-25 Identities = 176/245 (72%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291 || || || | |||||| | |||||||| || || ||||| ||| || || || Sbjct 41175 TCACCAATCAGGATGAGCCTTGTGGTCTGAAAGAGCCTTTCGTCGTCCCAGTCGGGGTGG 41116 Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351 | | ||||| || |||||||||| ||||||||| | ||||||||| |||||||||||| Sbjct 41115 ACCTCCTTCAGCACGTCGCACACCCGGTTGTGTTCGCGGAGCCAGATGGTGGCGTACATC 41056 Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411 || || || || |||||||| || ||||| || |||||||| | || ||| ||| Sbjct 41055 ATCAGACCGGGGACCAGGCCGAAGGCCTCGTGGCCGACAGCGAAGCGGTGAGATTCTGGC 40996 Query 9412 ACTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCA 9471 || | ||||| ||| ||||| || ||||| || || | || || |||||||| Sbjct 40995 ACATGAGGAGGGTAGTGCATGTCGACACCCACGTCCTTTACTGTTGGTGGGTACATTTCT 40936 Query 9472 CCGTC 9476 || || Sbjct 40935 CCATC 40931 Score = 84.2 bits (92), Expect = 3e-11 Identities = 121/168 (72%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 9070 TCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATACGATTTTGG 9129 || ||||| |||| |||||||| |||| |||||||||| || || || || ||| Sbjct 41597 TCAGGCATCAGAGGGTGCCAGTGGTACAGGGTGTTAAACTCAGATGCAATGCGGTTCTGG 41538 Query 9130 TACTGGAA-CGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAGCTGAAAATGGTAGCC 9188 |||||||| || | ||||||||| ||||| | |||| |||| || || ||||| Sbjct 41537 TACTGGAAGCGCTG-GTTAAAGAGCAGCTCGGGGTCAAACTTGAGCTTGAAGTGATAGCC 41479 Query 9189 GCTGAGCTGCTGAACGTATTGCGTCACGATAATGTTGATGGTTTCCCC 9236 ||| || ||||| ||||| | | | | ||| |||||||| || || Sbjct 41478 GCTCAGGTGCTGCACGTAGTCCTCAATCACAATCTTGATGGTCTCACC 41431 >seq570 Length=446048 Score = 141 bits (156), Expect = 1e-28 Identities = 180/248 (73%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 8303 GGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCG 8362 ||||||| |||| |||| ||| || || || | ||| | | |||||||| | Sbjct 92064 GGACACCACTTGGTGTTGAGACACACCAGCTTCTTCAAAGTGGACGTTTTGACGATGTTG 92005 Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422 || ||| ||||| ||||||||||||||||||||||| | |||||||||||| ||| Sbjct 92004 AAGCCCGTCTCTCCTCCGAAGGTGCTGGGCTTCCAGTATTCAGGGGAGCAGATGGGGTTT 91945 Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482 || || || || |||||||| ||||| || | ||| | ||||||||||| || ||| Sbjct 91944 CCCTGCAGACCCTTCAGGGAGAAGGGAGCACCGATCTCCACCATGCTCTCACCAAATATG 91885 Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCT 8542 |||| || | ||| |||| || || |||| ||| | ||||| ||| || | |||| Sbjct 91884 CCGTTCAAGCGAGTCTTCTCCAGCATGATGCCGGGGTAAAACTCCAGAGCATCTATGTCT 91825 Query 8543 CCGTAAAG 8550 ||||| || Sbjct 91824 CCGTAGAG 91817 Score = 127 bits (140), Expect = 3e-24 Identities = 177/247 (72%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291 || || || |||||||||| |||||||||||||| ||||| || ||| ||||| Sbjct 87027 TCACCAATGATGATGAGTCTGGTGGTCTGGAACAGCTGCTCATCGTCCCAGCTGGGATGC 86968 Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351 || ||||| || || ||||| |||||||| ||||| ||||| || ||||||||||| Sbjct 86967 TCAGCCTTCAGGACGTCACACACTCTGTTGTGCTCCCTCAGCCATATGGTGGCGTACATG 86908 Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411 |||| || || | ||||| || |||| ||||||| ||||| ||| | | || Sbjct 86907 GTGAGGCCCGGCAGGAGGCCGAACACCTCCTGACCGATGGCCAGGCGCTGCTCAGCTGGG 86848 Query 9412 A---CTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATT 9468 | |||| ||| || | ||||||||| | || || |||| ||||| ||||| Sbjct 86847 AAGGCTTC---AGGGTAAACCATGTGCACGGGCACCTCAGACACCGTTGGGGGGTACATC 86791 Query 9469 TCACCGT 9475 ||||||| Sbjct 86790 TCACCGT 86784 >seq286 Length=612266 Score = 111 bits (122), Expect = 2e-19 Identities = 190/276 (69%), Gaps = 0/276 (0%) Strand=Plus/Minus Query 8272 CTCCTCATCGGGAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAG 8331 |||||| | ||||||| ||| || | | |||||| | || ||| |||||| || Sbjct 498639 CTCCTCTGCTGGAACTCTGAAAGCCACATAAGGACACGTCCTGGTGTTCAGACAGACCAG 498580 Query 8332 AGACTGAATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGG 8391 || | || || || || || | || || || | || |||||||||||||| Sbjct 498579 CTTCTTGAGTGTGGCAGAGTTTACTATGTCAAAGCCGACTTTGCCTCCGAAGGTGCTGGG 498520 Query 8392 CTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGC 8451 ||||||||| | || ||||| || ||| ||| |||||||||||||||||| || || Sbjct 498519 CTTCCAGTAATCTGGAGAGCATATAGGGTTTCCCAGGAGGCCTTTGAGGGAGAAGGGGGC 498460 Query 8452 CCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAA 8511 |||| ||| | ||||| || ||||| |||| || |||| || |||| || || Sbjct 498459 GCCCATCTCCACCATGCTTTCTCCGAATATGGACCCCGGTCGGGTTTTCTCCAACATCAA 498400 Query 8512 TCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTA 8547 |||| || | ||| | ||| || | ||| ||||| Sbjct 498399 GCCGGGATAAAACTCGAGAGCGTCAATGTCGCCGTA 498364 Score = 89.7 bits (98), Expect = 7e-13 Identities = 175/257 (68%), Gaps = 4/257 (2%) Strand=Plus/Minus Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291 || ||||| |||||||| |||||||||||||| || ||||| || ||| ||||| Sbjct 493682 TCACCGATGATGATGAGCCGAGTGGTCTGGAAAAGCTGCTCATCGTCCCAGGTGGGATGC 493623 Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351 ||| |||||| | || || || | ||| || ||||| ||||| | ||||| |||| Sbjct 493622 TCTGCTTTCAGGATGTCACAGACTCGGTTATGCTCCCTCAGCCACAGGGTGGCATACAGG 493563 Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411 | ||||| | || ||||| | || ||||||| |||| || | | || Sbjct 493562 CCCAAGCCAGGGAGAAGTCCAAACACTTCCTGACCGATGGCCATCTGCTGCTCCACAGGG 493503 Query 9412 ACTTCGGGAGGATAGATCATGTGCACCTGGACG--TCTTTGACCGAGGGGGGATACATTT 9469 || | ||||| ||| |||| | || ||||| || || ||||| || ||||| | Sbjct 493502 ACCCCAGGAGGGTAGCTCATCTTAAC--GGACGCTTCAGCTACAGAGGGAGGGTACATCT 493445 Query 9470 CACCGTCAATCATCTGA 9486 | || ||||| | |||| Sbjct 493444 CTCCATCAATTAACTGA 493428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716824665134720