Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq210 132 4e-26 seq1721 131 2e-25 >seq210 Length=679747 Score = 132 bits (146), Expect = 4e-26 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | |||||| || || ||| ||| ||||| ||||| ||||| ||||| ||||| Sbjct 555978 AGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGAGTGCGA 555919 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||| ||||| || ||||| | ||| ||||| | || | | ||| Sbjct 555918 CCATCTTCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCT 555859 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||||| |||||| |||| ||| | | ||||||||| | ||||||||||| || Sbjct 555858 TTGTCCTGGATTTTA-GCTTTGACGTTCTCGATAGTGTCGCTGGGCTCCACCTCCAGTGT 555800 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || || || || ||||| || || ||||||||| Sbjct 555799 GATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATG 555760 Score = 129 bits (142), Expect = 5e-25 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || ||||| || ||| ||| ||||| ||||| ||||| ||||||||||| Sbjct 555750 AGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGA 555691 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||| || || |||||||| | ||| ||||| | || | | ||| Sbjct 555690 CCATCTTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCT 555631 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 |||||| ||| ||| |||| | | |||||||| | ||||||||||| || Sbjct 555630 TTGTCCTGGATCTTTGCTTTCACATTCTCTATGGTGTCGCTGGGCTCCACCTCCAGGGTG 555571 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || ||||| |||| ||||| || || |||||||| || Sbjct 555570 ATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCATCTT 555530 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || ||| ||| ||||| ||||| ||||| ||| Sbjct 556438 CCTCCACGGAGACGCAGGACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 556379 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 |||||||| | || || |||||||| || ||||| ||||| ||||| ||||| Sbjct 556378 AGGGTGCGACCATCTTCCAGCTGCTTACCAGCGAAAATCAGACGCTGCTGGTC 556326 >seq1721 Length=144067 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| | ||||| | || || || || ||| ||||||||| ||||| ||||||||| Sbjct 118154 CCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 118095 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||||||||| ||||| |||| | ||| ||||| | |||| Sbjct 118094 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGA 118035 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || ||||||||| |||||| ||| | | | ||||| || | ||| ||| Sbjct 118034 ATGCCTTCCTTGTCCTGGATTTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACC 117975 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || | || || || || || || || || || || || ||||||||||| Sbjct 117974 TCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCATGTT 117925 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || || || || ||| ||||||||| ||||| ||||| ||||||||||| Sbjct 118601 AGACGCAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 118542 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| ||||| |||| | ||| ||||| | ||||| | ||| Sbjct 118541 CCATCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATTCCTTCC 118482 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 ||||| ||| || ||| | | | |||||||| | ||| ||||||| || Sbjct 118481 TTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTG 118422 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || || ||||| ||||| |||||||| Sbjct 118421 ATGGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 118384 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| | ||||| | ||| || || || ||| || || || ||||| ||||| ||| Sbjct 118382 CCGCCCCTCAGACGCAGCACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAG 118323 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||||||||| || || || || | ||| ||||| | |||| Sbjct 118322 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGA 118263 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || ||||||||| ||| || ||| | | | ||||| || | ||| ||| Sbjct 118262 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACC 118203 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || || || || || || ||||| ||||| |||||||| Sbjct 118202 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 118156 Score = 109 bits (120), Expect = 5e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||| || || || ||| ||||||||| ||||| ||||||||||||||||| Sbjct 109114 AGACGCAGCACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 109055 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| ||||| |||| | ||| ||||| | ||||| || ||| Sbjct 109054 CCATCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCC 108995 Query 41765 TTGTC 41769 ||||| Sbjct 108994 TTGTC 108990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462270378941600