Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq854 524 9e-144 seq681 120 4e-22 >seq854 Length=240782 Score = 524 bits (580), Expect = 9e-144 Identities = 1071/1582 (68%), Gaps = 24/1582 (2%) Strand=Plus/Plus Query 53445 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG 53504 |||| || ||||| |||||||||| | || ||| || ||||| |||| || || | Sbjct 74972 CGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCTTTCGAACG 75031 Query 53505 GATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTAT 53564 | ||| | ||| || || ||||| || || || || ||||| || || || || || | Sbjct 75032 GGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGCCTGT 75091 Query 53565 GTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 53624 | | ||| || || | |||||||| || | ||||| |||||||||||||| || || | Sbjct 75092 GGCGCTTGTTGGACTTCTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATCTTGT 75151 Query 53625 TGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTC--- 53681 | | |||| |||||| ||| ||| |||| | ||||| |||| ||||| ||| Sbjct 75152 TCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAA-AGTCCGC 75210 Query 53682 -CATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTA 53740 || | | || ||||||| | ||| | || |||||||||||||| |||||||| | Sbjct 75211 TCAGCGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACNGCTACCTC-GTC 75269 Query 53741 GCATC-CGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATT 53799 || | | |||| | || || ||||| ||||| || | ||||||||| || | ||| Sbjct 75270 GCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGATT 75329 Query 53800 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTC 53859 || || || ||||| | || || ||||| || || || ||| |||| || || ||||| Sbjct 75330 CTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTC 75389 Query 53860 AATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCT 53919 | ||||||| ||||| || || | ||| || | ||||| | | | ||| | Sbjct 75390 AGTCTGGGACTCTATGATGGCATGCCAAACCTGCTGGGCCTTCACCACACGCTTGACGCG 75449 Query 53920 CTTTTCTCTTTCGTA--TAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCC 53977 |||| | ||||| | ||||| | || |||||||| || ||||| | || | Sbjct 75450 GCCTTCTTTCTCGTATTTGGTGTAGAGCTTC--TCAAACTCCTCCCCCCAGCACTCGTTC 75507 Query 53978 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 54037 | || |||||||| || |||||||| | ||||| || || | || ||| | | | Sbjct 75508 AGCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTCC 75567 Query 54038 ATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTT 54096 || || | ||||| ||||| | ||| || ||| || ||||||| ||| || ||||| || Sbjct 75568 ATGAACAAGTCAGGGATCCACATAGCGTAGAAA-AGGTCTCTGGCTCTCTGCTCCTCTTT 75626 Query 54097 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 54156 ||| || ||||| || | || ||||| | | ||||| |||||||| ||||||| ||| Sbjct 75627 TCCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTA 75686 Query 54157 TATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 54216 |||| | | | ||||||| |||||||| ||||| || | || | |||||||| || Sbjct 75687 CATGGCGAAAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTT 75746 Query 54217 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 54276 |||||||||| ||| || | || |||||||| |||||||| || | ||| || || Sbjct 75747 GTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACT 75806 Query 54277 TCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAA 54336 ||| | | | || || | | | ||| || || || ||| || ||||| | Sbjct 75807 TCCCGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGACTTGGAGATGAG 75866 Query 54337 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 54396 ||||| |||| | ||| ||||| |||||||| || || |||||| ||||| || || Sbjct 75867 CGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAG 75926 Query 54397 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 54456 || ||||| |||| || | | | || || |||||||| | || || || || || Sbjct 75927 GAAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAAAGAGTGTCGGGGAGGCATG 75986 Query 54457 CGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTG 54516 || ||||| || || || || || ||||| || || || |||| || ||||| ||| Sbjct 75987 GGTGAACCACTTCTCTGACAGCAGGTTGTAGGTTTCAATCGCTGCATCAATATCTGTTTG 76046 Query 54517 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 54576 ||| || || || | || | ||| | ||||||||| |||| || | | ||| ||| Sbjct 76047 ATGGATCCCCACAGAAACCCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGCCGTT 76106 Query 54577 TATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 54636 || |||| || |||||| |||| |||||||| || || | ||||| ||||| || Sbjct 76107 GATCTTCAACAGGTAGGACCGCTCCAGGGTTTTAAAGCCGAAGAAATTGTACGAAAAATC 76166 Query 54637 TCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT 54696 || || || || || | ||||| || || || | | | || | || | || Sbjct 76167 GCGGTCATATATTATGGCCGAGTTCAGGCGGTCTTTGTTCTGGAGGACGATGTCAAGCGT 76226 Query 54697 AATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAAT 54755 | ||| || | || ||||| || | |||| || || | ||||| | | | Sbjct 76227 -CTCCTTGGAGACCATGGGAGAGTGACGCTTATTTAGTGGGTTTATGTAGTTGTACAGGT 76285 Query 54756 CCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 54815 ||| |||||| ||||| || | || ||||| || ||||| || ||||| ||||| || | Sbjct 76286 CCTCCATCACGTCACTGAACACCTTCTTTGTCTCCTTGTGCAGGTTTGAGACGGCGATCC 76345 Query 54816 TAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTG 54875 || || || ||||| || || || |||| || || ||| || | | Sbjct 76346 GTGCAGCGAGGATGGCGTAGTCAGGGTGTTTGGTGGTCAGAGTAGCAGAGA--------- 76396 Query 54876 TCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAG 54935 || ||||| | || || || || |||||||| || | || ||||| |||||||| | Sbjct 76397 CCAAGGTGTCGAGCTCCACNGTGGTGACTCCATTGTACAAACCCTGGATCACCTTCATGG 76456 Query 54936 CTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAG 54995 || | || || | | |||| ||||| ||| || || | || || |||| Sbjct 76457 TAATCTGGGCTGGGTCCACAAAGTCAGCGTTTAGGCCGTAGCACAGCTTCTGGATGCGAG 76516 Query 54996 ATGTGATTTTATCAAACATGAC 55017 | ||||||||||| |||||||| Sbjct 76517 AGGTGATTTTATCGAACATGAC 76538 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934 |||| ||||| || ||||| || ||||||||| ||| | || ||||| || ||||| | Sbjct 74316 TCCAGCCGTAGAAGTGCATGCTGGTTAGTTTGCCATAGTTGGGCTCTGCGATGTGGATGT 74375 Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994 ||| ||| || || || ||||||||||| || | ||| || ||||| || ||||| || | Sbjct 74376 TCAGAGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCTGCCATCTTGATGATGGTTT 74435 Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045 | || | |||||||| | ||||||||| | |||| | || | ||||| Sbjct 74436 TCTGGGAGATTTCCCACACAGTTTTATACAGCTGCTTCACGTCGTTTGGAA 74486 >seq681 Length=269650 Score = 120 bits (132), Expect = 4e-22 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 54741 CATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGAT 54800 || || || ||||| ||| | || ||||||| | ||| || || ||||||||||||| Sbjct 108829 CACAGCTATATAAAGCCTGTCTTAC--CACTAAAGACTTTCTTGGTCTCTTTGTGTAGAT 108772 Query 54801 TTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGG 54860 | || ||||| || | || || || ||||||||||| |||| || || || ||||| Sbjct 108771 TGGACACGGCGATCCGTGCAGCCAGGATGGCATAATCAGGATATTTGGTGGTGAGAGTGG 108712 Query 54861 CTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTT 54920 |||| | || |||| ||||||||||| || || || || |||||| | || | || | Sbjct 108711 CTGCCGTCTCTGCTGCCAGAGTGTCCAGCTCCACTGTGGTGACTCCACTGTACAGGCCCT 108652 Query 54921 GGATAACCTTCAT 54933 |||| |||||||| Sbjct 108651 GGATCACCTTCAT 108639 Score = 111 bits (122), Expect = 2e-19 Identities = 102/129 (79%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 54028 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 54087 |||||||||||||||||| || || ||||| | ||| | || |||||||||| || || Sbjct 110136 CACTCGTTTCATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCCTCTG 110077 Query 54088 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 54147 ||||| || || || |||||||| || || |||||||| | | ||| ||||||||||| Sbjct 110076 CTCCTCTTTGCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCCACGG 110017 Query 54148 TTCCAAGTA 54156 |||| ||| Sbjct 110016 CTCCAGGTA 110008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593466804375360