Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq746 185 1e-41 seq24792 84.2 3e-11 >seq746 Length=686128 Score = 185 bits (204), Expect = 1e-41 Identities = 147/177 (83%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || |||||| |||| || || | |||||||||||| || | |||||||| |||||||| Sbjct 480272 CTGGAGGCCTGTGATATGTGCAATCATGTAGGTCAGAAGTGCATAGCTGGCGATGTTGAA 480331 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 ||||||||| || ||||| |||||||||||||||||||||||||| || ||||| ||| | Sbjct 480332 GGGCACCCCGAGGCCCATATCCCCCGAGCGCTGGTACAGCTGGCACGACAGCTCGCCGTC 480391 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922 |||||||||||||||||| ||||||||| ||||| |||||| |||||||| Sbjct 480392 ACACACGTAGAACTGGCACAGAGCGTGGCAGGGTGGCAGAGCCATGCTTGGCAGGTC 480448 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 146198 CCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCA 146257 || |||| ||||||||||| ||||| | ||| ||||||||||||||| ||||||| |||| Sbjct 481018 CCTTGATAAACCAGAGCAGTTCTTCTAAGACTCCCCTCCAGAAGACCTTCTTGGTTGTCA 481077 Query 146258 GCAGGGGGAACTGGCC 146273 |||| || ||||| || Sbjct 481078 GCAGTGGAAACTGACC 481093 Score = 82.4 bits (90), Expect = 9e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| |||| || ||||||||||||||||||||||| || || ||||| || || ||| Sbjct 480731 GTACTCGGCACCAAAGTGCCTCCACTGGAACCCGTACACAGGGCCCAGATCTCCCTCCTC 480790 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 | || ||||| | | || || ||| || |||||||| ||||| ||||| Sbjct 480791 TCGGTCGGTGAGCCCCAGATTGTCCAGAAAAGCCCTAGAACCGTTGGCTTCCCAAATCTT 480850 Query 146160 GACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199 || || || | |||||||| |||| | ||||| ||| Sbjct 480851 TACTCCTTTCTCTGAGAGCTCTTTGGCATTTGTGGATCCC 480890 >seq24792 Length=1149 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 146198 CCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCA 146257 || |||| ||||| ||||| ||||| | ||| ||||||||||||||| ||||||| |||| Sbjct 28 CCTTGATAAACCACAGCAGTTCTTCTAAGACTCCCCTCCAGAAGACCTTCTTGGTTGTCA 87 Query 146258 GCAGGGGGAACTGGCC 146273 |||| || ||||| || Sbjct 88 GCAGTGGAAACTGACC 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589823568541280