Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq81 145 8e-30
seq1349 113 5e-20
seq1534 111 2e-19
seq5956 96.9 4e-15
>seq81
Length=187384
Score = 145 bits (160), Expect = 8e-30
Identities = 171/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || |||||||| || || ||||| |||||||| | || || || ||| |
Sbjct 173176 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 173235
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | |||| || || | ||||| || ||||| ||| | || ||
Sbjct 173236 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCA 173294
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || |||| || ||||| |||||||| || | ||||||||| |||||||||
Sbjct 173295 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 173354
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||||| |||| || || || || |||| ||||||| |||
Sbjct 173355 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGGGGC 173403
Score = 145 bits (160), Expect = 8e-30
Identities = 171/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || |||||||| || || ||||| |||||||| | || || || ||| |
Sbjct 173404 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 173463
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | |||| || || | ||||| || ||||| ||| | || ||
Sbjct 173464 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCA 173522
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || |||| || ||||| |||||||| || | ||||||||| |||||||||
Sbjct 173523 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 173582
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||||| |||| || || || || |||| ||||||| |||
Sbjct 173583 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGGGGC 173631
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || |||||||| || || ||||| |||||||| | || || || ||| |
Sbjct 173632 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 173691
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | |||| || || | ||||| || ||||| ||| | || ||
Sbjct 173692 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCA 173750
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || |||| || ||||| |||||||| || | ||||||||| |||||||||
Sbjct 173751 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 173810
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||||||| |||| || || || || |||| ||||||| ||
Sbjct 173811 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGTGG 173858
Score = 138 bits (152), Expect = 1e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || || |||||||| || || ||||| |||||||| | || || || ||
Sbjct 172945 AACATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCC 173004
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | | | |||| || || | ||||| || ||||| ||| | ||
Sbjct 173005 AGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGAT 173064
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| | || |||| || ||||| |||||||| || | ||||||||| |||||||
Sbjct 173065 CAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTAC 173124
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||||||| |||| || || || || |||| ||||||| |||
Sbjct 173125 AACATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGGGGC 173175
>seq1349
Length=1030505
Score = 113 bits (124), Expect = 5e-20
Identities = 159/222 (72%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| ||||| || || || || || | ||| ||||||| | | || ||| |||
Sbjct 331457 ATGCAGATATTTGTGAAGACCCTGACTGACAAGACCATCAGTCTGCATGTGGAACCCAAT 331398
Query 40750 GACAGC---GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| ||| | | |||||| || || | || || ||||| ||||| | ||
Sbjct 331397 GACAGCATTGTGAATA---TCAAGGTCAAGATCCATGATAAGGAGGGGATCCCTCCTGAT 331341
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || ||||||| || ||||| |||||| | |||| | ||||||| ||||||
Sbjct 331340 CAGCAGCGTCTCATCTTTGCTGGCAAGCAGCTGCAGGACGGCCACACCCTCTCTGACTAC 331281
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTG 40908
||||||||||||||| ||| || || || ||| | || |||
Sbjct 331280 AACATCCAGAAGGAGTTCACCCTCCACCTTGTGCTCCGTTTG 331239
Score = 96.9 bits (106), Expect = 4e-15
Identities = 156/223 (70%), Gaps = 6/223 (3%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| ||||| || || || || || ||||| ||||||| | | || ||| |||
Sbjct 331685 ATGCAGATATTTGTGAAGACCCTGACTGGCAAGACCATCAGTCTGAATGTGGAACCCAAT 331626
Query 40750 GACAGC---GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| ||| | | |||||| || || | || || ||||| ||||| | ||
Sbjct 331625 GACAGCATTGTGAATA---TCAAGGTCAAGATCCATGATAAGGAGGGGATCCCTCCTGAT 331569
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| | || ||||| || || || ||||| || || | | || ||||| | ||||
Sbjct 331568 CAGCAGTGTCTGATCTATGCTGGTAAGCAGCTTGAGGATGGGTGCGCCCTCTCCACCTAC 331509
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGA 40909
|||||||||| | || |||| || || || ||| | || ||||
Sbjct 331508 AACATCCAGATGAAGTCCACCCTCCACCTTGTGCTCCGTTTGA 331466
Score = 89.7 bits (98), Expect = 5e-13
Identities = 96/127 (76%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
|| || ||||| ||||| | |||||||| | || ||||| || || || ||||| ||
Sbjct 331820 GATAAGGAGGGGATCCCTCCTGACCAGCAGTGTCTGATCTATGCTGGTAAGCAGCTTGAG 331761
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|||| | || ||||| |||||||||||||||||||| |||| || || || ||| |
Sbjct 331760 GACGGGTGCTCCCTCTCTGACTACAACATCCAGAAGGAATCCACCCTCCACCTTGTGCTC 331701
Query 40903 CGCTTGA 40909
|| ||||
Sbjct 331700 CGTTTGA 331694
>seq1534
Length=15379
Score = 111 bits (122), Expect = 2e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 117032 GGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCC 117091
|| |||||| |||| ||||| || ||||| ||||| | ||||| || || || ||
Sbjct 8802 GGAGAGCGCGTGGTAGCCTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGGTCCTTTGCT 8743
Query 117092 GCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTC 117151
|||| || ||||| |||||| | ||||| |||||||||||||| ||| ||||||||||
Sbjct 8742 TCCATCTTCTGGCTGAAGAAAAGGGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTC 8683
Query 117152 ATCTCCAGGGACGAGG 117167
||| ||| |||||||
Sbjct 8682 ATCAGCAGAGACGAGG 8667
Score = 96.9 bits (106), Expect = 4e-15
Identities = 79/96 (82%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 116800 TCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTT 116859
|| ||| ||||||||| | |||||||||||||| | ||||| |||| ||||| || ||
Sbjct 11029 TCAGGTGGAGCGTTTCACCCAGGAGGTGCAGGTCACGGAGGCCAGGTGTTTCTATGGGTT 10970
Query 116860 TCAGATCGCCATGGAGAACGTGCACTCGGAAATGTA 116895
|||||||||||||||||| | ||||| || |||||
Sbjct 10969 CCAGATCGCCATGGAGAACATCCACTCTGAGATGTA 10934
Score = 91.5 bits (100), Expect = 2e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635
|| || |||||| ||||||||||| || || || || ||||| || | |||| ||||
Sbjct 11448 GAACCACTGCTGAAGGAGAACCCCCGTCGCTTTGTCATCTTCCCTATCAAGTACCAGGAC 11389
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688
|| |||| |||||||| ||||| ||||| || |||||||||| || |||||
Sbjct 11388 ATCTGGCAGATGTACAAGAAGGCAGAGGCATCATTCTGGACCGCAGAAGAGGT 11336
>seq5956
Length=703
Score = 96.9 bits (106), Expect = 4e-15
Identities = 79/96 (82%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 116800 TCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTT 116859
|| ||| ||||||||| | |||||||||||||| | ||||| |||| ||||| || ||
Sbjct 491 TCAGGTGGAGCGTTTCACCCAGGAGGTGCAGGTCACGGAGGCCAGGTGTTTCTATGGGTT 550
Query 116860 TCAGATCGCCATGGAGAACGTGCACTCGGAAATGTA 116895
|||||||||||||||||| | ||||| || |||||
Sbjct 551 CCAGATCGCCATGGAGAACATCCACTCTGAGATGTA 586
Score = 91.5 bits (100), Expect = 2e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635
|| || |||||| ||||||||||| || || || || ||||| || | |||| ||||
Sbjct 72 GAACCACTGCTGAAGGAGAACCCCCGTCGCTTTGTCATCTTCCCTATCAAGTACCAGGAC 131
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688
|| |||| |||||||| ||||| ||||| || |||||||||| || |||||
Sbjct 132 ATCTGGCAGATGTACAAGAAGGCAGAGGCATCATTCTGGACCGCAGAAGAGGT 184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514998093680320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |