Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq81 109 5e-19 >seq81 Length=187384 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||| | ||||| ||| || ||||| Sbjct 173151 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTG 173092 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || ||||| |||| || | ||||||||| || || ||||| |||||||| || || Sbjct 173091 CTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTT 173032 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | |||||| || ||| ||||| | || | || ||||| || Sbjct 173031 GGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGT 172972 Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739 ||| ||||||||||| ||||||||| Sbjct 172971 CAGGGTTTTTACAAAGATCTGCATG 172947 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||| | ||||| ||| || ||||| Sbjct 173379 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTG 173320 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || ||||| |||| || | ||||||||| || || ||||| |||||||| || || Sbjct 173319 CTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTT 173260 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | |||||| || ||| ||||| | || | || ||||| || Sbjct 173259 GGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGT 173200 Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739 ||| ||||||||||| ||||||||| Sbjct 173199 CAGGGTTTTTACAAAGATCTGCATG 173175 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||| | ||||| ||| || ||||| Sbjct 173607 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTG 173548 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || ||||| |||| || | ||||||||| || || ||||| |||||||| || || Sbjct 173547 CTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTT 173488 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | |||||| || ||| ||||| | || | || ||||| || Sbjct 173487 GGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGT 173428 Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739 ||| ||||||||||| ||||||||| Sbjct 173427 CAGGGTTTTTACAAAGATCTGCATG 173403 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||| | ||||| ||| || ||||| Sbjct 173835 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTG 173776 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || ||||| |||| || | ||||||||| || || ||||| |||||||| || || Sbjct 173775 CTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTT 173716 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | |||||| || ||| ||||| | || | || ||||| || Sbjct 173715 GGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGT 173656 Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739 ||| ||||||||||| ||||||||| Sbjct 173655 CAGGGTTTTTACAAAGATCTGCATG 173631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433648876141744