Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq738 105 8e-18 seq81 102 9e-17 seq29872 98.7 1e-15 seq19796 96.9 4e-15 seq2275 95.1 1e-14 seq2887 91.5 2e-13 seq23304 89.7 6e-13 seq23301 89.7 6e-13 seq17056 89.7 6e-13 seq9238 89.7 6e-13 seq7699 89.7 6e-13 seq5692 89.7 6e-13 seq1137 89.7 6e-13 seq791 89.7 6e-13 >seq738 Length=1186676 Score = 105 bits (116), Expect = 8e-18 Identities = 76/87 (87%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 60053 TATGAAAAATTT--TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGG 60110 |||||||| | | ||||| || | ||||||||||||| ||||||||||||||||||||| Sbjct 39044 TATGAAAATTCTGGTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGG 39103 Query 60111 ACATACTCACCACTATACTACCGAGGA 60137 |||||||||||||||||| |||||| Sbjct 39104 GGATACTCACCACTATACTAACGAGGA 39130 >seq81 Length=187384 Score = 102 bits (112), Expect = 9e-17 Identities = 163/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 42950 CTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 43009 |||||| || || || | ||||| || | || | ||| |||||| || || ||||| Sbjct 173865 CTATTGACCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTA 173806 Query 43010 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069 || | || || || | || || |||||||| ||||| || || || | |||||| || Sbjct 173805 GTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATC 173746 Query 43070 GGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGA 43129 | || | || ||||||||| ||| || || | || | | |||||||| | Sbjct 173745 AGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGG 173686 Query 43130 TTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || | |||||||| ||||| || || || ||||||||||| ||||| Sbjct 173685 CTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173632 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || | || || |||||||| ||||| || Sbjct 173367 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 173308 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | |||||| || | || | || ||||||||| ||| || || | | Sbjct 173307 GATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 173248 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||||| | ||||| || | |||||||| ||||| || || || ||||| Sbjct 173247 CTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTAC 173188 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 173187 AAAGATCTGCAT 173176 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || | || || |||||||| ||||| || Sbjct 173595 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 173536 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | |||||| || | || | || ||||||||| ||| || || | | Sbjct 173535 GATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 173476 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||||| | ||||| || | |||||||| ||||| || || || ||||| Sbjct 173475 CTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTAC 173416 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 173415 AAAGATCTGCAT 173404 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || | || || |||||||| ||||| || Sbjct 173139 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 173080 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | |||||| || | || | || ||||||||| ||| || || | | Sbjct 173079 GATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATT 173020 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| || | ||||| || | |||||||| ||||| || || || ||||| Sbjct 173019 CTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTAC 172960 Query 43172 AAAGATTTGCATTTT 43186 |||||| ||||| || Sbjct 172959 AAAGATCTGCATGTT 172945 >seq29872 Length=509 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| || |||| || | ||||||||||||| ||||| |||||||||||||||| |||| Sbjct 415 AAAAACTTACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATAC 474 Query 60117 TCACCACTATACTACCGAGGAT 60138 | ||||||||||| ||||||| Sbjct 475 TGTCCACTATACTAACGAGGAT 496 >seq19796 Length=866 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||| |||| || | ||||||||||||||||||| |||||||||||||||| |||| Sbjct 559 AAAAATAAACTCCCCGTCGGGGAATCGAACCCTGGTCTTCCGCGTGACAGGCGGAGATAC 618 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||| |||||| Sbjct 619 TGTCCACTATACTAACGAGGA 639 >seq2275 Length=43787 Score = 95.1 bits (104), Expect = 1e-14 Identities = 71/82 (87%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 60057 AAAAATTTT-CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 ||| ||||| |||| || | ||||||||||||| ||||| |||||||||||||||| ||| Sbjct 23771 AAACATTTTACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATA 23712 Query 60116 CTCACCACTATACTACCGAGGA 60137 || ||||||||||| |||||| Sbjct 23711 CTGTCCACTATACTAACGAGGA 23690 >seq2887 Length=65953 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| | |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| Sbjct 55202 AAAAGTGACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACT 55143 Query 60118 CACCACTATACTACCGAGGA 60137 ||||||||||| |||||| Sbjct 55142 GTCCACTATACTAACGAGGA 55123 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| | |||| || | ||||||||||||| ||||| |||||||| ||||||| ||||| Sbjct 56230 AAAAGTGACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGATAGGCGGAGATACT 56171 Query 60118 CACCACTATACTACCGAG 60135 ||||||||||| |||| Sbjct 56170 GTCCACTATACTAACGAG 56153 >seq23304 Length=792 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 336 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 395 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 396 TACTAACGAGGA 407 >seq23301 Length=1685 Score = 89.7 bits (98), Expect = 6e-13 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 60076 GGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAG 60135 ||||||||||||||||||| |||||||||||||||| ||||| ||||||||||| |||| Sbjct 3 GGGAATCGAACCCTGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTATACTAACGAG 62 Query 60136 GA 60137 || Sbjct 63 GA 64 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 1184 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 1243 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 1244 TACTAACGAGGA 1255 >seq17056 Length=2305 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 1308 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 1367 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 1368 TACTAACGAGGA 1379 >seq9238 Length=1384 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 1073 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 1014 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 1013 TACTAACGAGGA 1002 >seq7699 Length=404 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 293 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 352 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 353 TACTAACGAGGA 364 >seq5692 Length=364 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 78 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 19 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 18 TACTAACGAGGA 7 >seq1137 Length=250317 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 247791 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 247850 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 247851 TACTAACGAGGA 247862 >seq791 Length=783190 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 761681 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 761622 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 761621 TACTAACGAGGA 761610 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 762141 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 762082 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 762081 TACTAACGAGGA 762070 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 775974 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 776033 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 776034 TACTAACGAGGA 776045 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 776691 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 776750 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 776751 TACTAACGAGGA 776762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571572204476960