Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq186 239 3e-58
seq1177 104 2e-17
>seq186
Length=681005
Score = 239 bits (264), Expect = 3e-58
Identities = 595/891 (67%), Gaps = 12/891 (1%)
Strand=Plus/Minus
Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747
|| ||||| | || ||| | |||||||||| || ||||| |||||| ||||||| ||
Sbjct 385535 CCTCTGAGCGAGGAGGAGAGAAACTTCCCCATCGCTTACTCCATGGTGATCCATGACAAC 385476
Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807
|| || | || || ||||| ||||| ||| | || ||||||||||| | ||||| |||
Sbjct 385475 ATCGAGATGTTCGAGCGGCTCCTGCGGGCCATCTACACCCCTCAGAACGTCTACTGCGTC 385416
Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867
|| |||||| ||| ||| || ||||| | ||| ||| || ||||||||||||
Sbjct 385415 CATGTGGATCAGAAATCCAAGGATGAATTCAAGGCGGCCGTCGTGGGGATTATTTCCTGC 385356
Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927
|||| || || ||| |||||| || || | ||||| || || || |||||| |
Sbjct 385355 CTCCCTAACGTGTTCCTGGCCACCAAATTAGAAAGCGTGGTGTACGCGTCGTGGTCCCGC 385296
Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTAC 107987
|| || || ||| ||||||| ||| ||| |||| | | || ||||||||||
Sbjct 385295 GTACAGGCGGACTTGAACTGCATGAGAGATCTGCTGGACTCCAAGGTTAAATGGAAGTAC 385236
Query 107988 TTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCC 108047
| ||||| ||||||||| | ||||||||||| || ||||| |||||||| | |||
Sbjct 385235 ATGCTGAACACATGCGGGGCCGACTTCCCCATCAAAACCAACAGGGAGATGGTGCAGGCG 385176
Query 108048 CTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAG-GTACCTTCTGAGTCCaaaaa 108106
|| |||| ||||||| | |||||| |||||||| ||| ||| | ||| ||||||
Sbjct 385175 CTGAAGACCCTGAAGGGCATGAACAGCATGGAGTCCGAGACCACCAAC-GAGAACAAAAA 385117
Query 108107 aaaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAG-CAAGATGA 108165
|| ||| |||| | | |||| || || || | | | ||| | | ||
Sbjct 385116 GGGCCGGTGGCTGTACCACCACCAGGTCACGGATGAGGTG-ATCAGAACAGACGTGGAGA 385058
Query 108166 AGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTC 108225
| ||| || || || ||||||||| | || | |||||| | |||| ||
Sbjct 385057 AAAGCCCCCCGCCCATAAAAACGCCCATGTTCTCCGGAANTGCCTACATCGTGGTGTCGA 384998
Query 108226 GAGCCTTTGTCCAACATGTCTTAGACA-ACCCTAAATCCCAAAGACTGGTTGAATGGGTC 108284
|| | || || ||||| || | |||| || | || || || | || ||||
Sbjct 384997 GAACTTTCGTGCAACACGTGAT-GACAGACGCAAAGGTGCAGGAGCTCCTGGAGTGGGAG 384939
Query 108285 AAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCG--TGCTCCGTGGA 108342
|| |||||||| || || ||||| ||||| ||||||||||| ||| | ||| | |
Sbjct 384938 AAGGACACCTACAGTCCGGACGAGCACCTGTGGGCCACCCTGCAGAGGATGCCCACAG-- 384881
Query 108343 TGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCA 108402
| || || || | || | || |||||| ||| || |||||| ||| | ||
Sbjct 384880 TCCCCGGGTCATTGCCCCACAACAGCAAGTACGACACGTCGGACATGCTGGCCCTGGCGC 384821
Query 108403 GGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCT 108462
| | ||||||||| ||| | ||| ||||| ||||||| || || |||||
Sbjct 384820 GCGTGGTCAAGTGGAGCTACTTGGCGGGTGATGTGGAACTGGGGGCCCCATACCGACCCT 384761
Query 108463 GCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTC 108522
|| | || | | |||| || | || | ||||| | |||||| | | ||| | |
Sbjct 384760 GCACCGGGGACTACAGGAGAGCGGTGTGTGTGTACGGAGTAGGGGACATCCAGTGGCTCC 384701
Query 108523 TC-CAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGAT 108572
|| || | | || || || ||||||||||| || || | | ||||||
Sbjct 384700 TCGCACAGAGA-CAACTATTCGCAAACAAGTTCGATCCTCAGATCGATGAT 384651
>seq1177
Length=17825
Score = 104 bits (114), Expect = 2e-17
Identities = 145/202 (72%), Gaps = 6/202 (3%)
Strand=Plus/Minus
Query 107754 AACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTG 107813
|||||||| | || ||| | ||| | ||||| ||||| ||||| |||||||| || |||
Sbjct 8782 AACTTTGAGAGACTTCTGAGGGCCATTTATGCTCCTCAAAACATTTACTGTGTTCATGTG 8723
Query 107814 GATGTGAAGTCCCCAGAGACTTTCAAAGAG---GCGGTCAAGGCCATTATTTCCTGCTTC 107870
|| || ||| || | | | | || || |||| ||||||| | |||||||||
Sbjct 8722 GACAAAAAATCCA---AGCCCTCCTATCAGTCTGCCGTCAGGGCCATTGTCTCCTGCTTC 8666
Query 107871 CCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTG 107930
||||| || ||||| | ||| | || ||||| |||||| ||||||| | ||
Sbjct 8665 CCCAACGTTTTCATCGTCAGCCGGCCTGTGGATGTGGTCTATGCCAGCTGGTCCCGCGTT 8606
Query 107931 CAAGCTGACCTGAACTGTATGG 107952
||||||||| | ||||||||||
Sbjct 8605 CAAGCTGACATTAACTGTATGG 8584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 348123076933368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |