Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq186 239 3e-58 seq1177 104 2e-17 >seq186 Length=681005 Score = 239 bits (264), Expect = 3e-58 Identities = 595/891 (67%), Gaps = 12/891 (1%) Strand=Plus/Minus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || ||||| | || ||| | |||||||||| || ||||| |||||| ||||||| || Sbjct 385535 CCTCTGAGCGAGGAGGAGAGAAACTTCCCCATCGCTTACTCCATGGTGATCCATGACAAC 385476 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 || || | || || ||||| ||||| ||| | || ||||||||||| | ||||| ||| Sbjct 385475 ATCGAGATGTTCGAGCGGCTCCTGCGGGCCATCTACACCCCTCAGAACGTCTACTGCGTC 385416 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 || |||||| ||| ||| || ||||| | ||| ||| || |||||||||||| Sbjct 385415 CATGTGGATCAGAAATCCAAGGATGAATTCAAGGCGGCCGTCGTGGGGATTATTTCCTGC 385356 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 |||| || || ||| |||||| || || | ||||| || || || |||||| | Sbjct 385355 CTCCCTAACGTGTTCCTGGCCACCAAATTAGAAAGCGTGGTGTACGCGTCGTGGTCCCGC 385296 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTAC 107987 || || || ||| ||||||| ||| ||| |||| | | || |||||||||| Sbjct 385295 GTACAGGCGGACTTGAACTGCATGAGAGATCTGCTGGACTCCAAGGTTAAATGGAAGTAC 385236 Query 107988 TTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCC 108047 | ||||| ||||||||| | ||||||||||| || ||||| |||||||| | ||| Sbjct 385235 ATGCTGAACACATGCGGGGCCGACTTCCCCATCAAAACCAACAGGGAGATGGTGCAGGCG 385176 Query 108048 CTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAG-GTACCTTCTGAGTCCaaaaa 108106 || |||| ||||||| | |||||| |||||||| ||| ||| | ||| |||||| Sbjct 385175 CTGAAGACCCTGAAGGGCATGAACAGCATGGAGTCCGAGACCACCAAC-GAGAACAAAAA 385117 Query 108107 aaaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAG-CAAGATGA 108165 || ||| |||| | | |||| || || || | | | ||| | | || Sbjct 385116 GGGCCGGTGGCTGTACCACCACCAGGTCACGGATGAGGTG-ATCAGAACAGACGTGGAGA 385058 Query 108166 AGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTC 108225 | ||| || || || ||||||||| | || | |||||| | |||| || Sbjct 385057 AAAGCCCCCCGCCCATAAAAACGCCCATGTTCTCCGGAANTGCCTACATCGTGGTGTCGA 384998 Query 108226 GAGCCTTTGTCCAACATGTCTTAGACA-ACCCTAAATCCCAAAGACTGGTTGAATGGGTC 108284 || | || || ||||| || | |||| || | || || || | || |||| Sbjct 384997 GAACTTTCGTGCAACACGTGAT-GACAGACGCAAAGGTGCAGGAGCTCCTGGAGTGGGAG 384939 Query 108285 AAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCG--TGCTCCGTGGA 108342 || |||||||| || || ||||| ||||| ||||||||||| ||| | ||| | | Sbjct 384938 AAGGACACCTACAGTCCGGACGAGCACCTGTGGGCCACCCTGCAGAGGATGCCCACAG-- 384881 Query 108343 TGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCA 108402 | || || || | || | || |||||| ||| || |||||| ||| | || Sbjct 384880 TCCCCGGGTCATTGCCCCACAACAGCAAGTACGACACGTCGGACATGCTGGCCCTGGCGC 384821 Query 108403 GGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCT 108462 | | ||||||||| ||| | ||| ||||| ||||||| || || ||||| Sbjct 384820 GCGTGGTCAAGTGGAGCTACTTGGCGGGTGATGTGGAACTGGGGGCCCCATACCGACCCT 384761 Query 108463 GCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTC 108522 || | || | | |||| || | || | ||||| | |||||| | | ||| | | Sbjct 384760 GCACCGGGGACTACAGGAGAGCGGTGTGTGTGTACGGAGTAGGGGACATCCAGTGGCTCC 384701 Query 108523 TC-CAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGAT 108572 || || | | || || || ||||||||||| || || | | |||||| Sbjct 384700 TCGCACAGAGA-CAACTATTCGCAAACAAGTTCGATCCTCAGATCGATGAT 384651 >seq1177 Length=17825 Score = 104 bits (114), Expect = 2e-17 Identities = 145/202 (72%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 107754 AACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTG 107813 |||||||| | || ||| | ||| | ||||| ||||| ||||| |||||||| || ||| Sbjct 8782 AACTTTGAGAGACTTCTGAGGGCCATTTATGCTCCTCAAAACATTTACTGTGTTCATGTG 8723 Query 107814 GATGTGAAGTCCCCAGAGACTTTCAAAGAG---GCGGTCAAGGCCATTATTTCCTGCTTC 107870 || || ||| || | | | | || || |||| ||||||| | ||||||||| Sbjct 8722 GACAAAAAATCCA---AGCCCTCCTATCAGTCTGCCGTCAGGGCCATTGTCTCCTGCTTC 8666 Query 107871 CCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTG 107930 ||||| || ||||| | ||| | || ||||| |||||| ||||||| | || Sbjct 8665 CCCAACGTTTTCATCGTCAGCCGGCCTGTGGATGTGGTCTATGCCAGCTGGTCCCGCGTT 8606 Query 107931 CAAGCTGACCTGAACTGTATGG 107952 ||||||||| | |||||||||| Sbjct 8605 CAAGCTGACATTAACTGTATGG 8584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348123076933368