Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq854 450 1e-121
seq681 129 5e-25
>seq854
Length=240782
Score = 450 bits (498), Expect = 1e-121
Identities = 1069/1615 (66%), Gaps = 35/1615 (2%)
Strand=Plus/Plus
Query 22388 ATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGA 22447
|||| | |||||| || ||||||||||| || | | |||| ||||||| ||
Sbjct 74601 ATGAGCTTATTTTTCATGTCCTCGTTCCACAACCCCCTCTCCGTCAGGTCTTTGAGGAGG 74660
Query 22448 TGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTG 22507
||| |||| || | || ||||| ||||||| ||| | ||| ||| |||||| |||
Sbjct 74661 TGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTG 74720
Query 22508 AACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGC 22567
| | ||||| ||| || ||||| ||||| ||||| ||||| || ||||| ||||||||
Sbjct 74721 TAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATCGGG 74780
Query 22568 GCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAG 22627
|| || || || ||| |||| ||||||||| | ||||| ||| |||| | ||||
Sbjct 74781 GCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTCCAG 74840
Query 22628 TCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTC 22687
||| |||| |||| |||||| || |||||||| ||||| || | | ||| ||
Sbjct 74841 TCCAACAGGTCGGTGGGCGTC---TTCTCCCACATGTCGTACTGAAGGATGCCCTTGCTG 74897
Query 22688 GCCGGGCTGCCTTCGTACGTTTCGTACGGACC----ATATATCGCGGCAAGTTCGCAGCT 22743
||||| ||||||||| ||||||||||| ||
Sbjct 74898 ACCGGGGAGCCTTCGTAGGTTTCGTACGGCCCGAGCNNNNNNNNNNNNNNNNNNNNNNNN 74957
Query 22744 CGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCA-ATTCGGCGGCGG 22802
| || |||| || || ||||||||||| | |||||| | | | | |
Sbjct 74958 NNNNNNGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAG-CTT 75016
Query 22803 CGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTA 22862
|| ||||||| |||| |||||| | | ||| ||||| |||| |||||| || || |
Sbjct 75017 CGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGA 75076
Query 22863 TACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCG 22922
| || || || | || | || ||| | || ||||||| ||||| ||||
Sbjct 75077 TTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACTGGATAGTAATTAA 75136
Query 22923 AATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAA 22982
||| || | ||||||||||| || || | || || | | ||
Sbjct 75137 TATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAA 75196
Query 22983 AGTCGTAAACGCCCGATT----GTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTG 23038
|||| ||| | ||| | || || || |||||| |||| ||||| |||||
Sbjct 75197 AGTC--AAAAGTCCGCTCAGCGGTG--ACGTACATGTTGAGTGCGACGGAGGCCAGATTA 75252
Query 23039 CATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACAC 23098
|| || || |||||||| || ||||| || |||||||| || ||||||||||| | |
Sbjct 75253 CAAACNGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTC 75312
Query 23099 TTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATG 23158
|| || ||||||| ||| ||||||||| || | |||||| | ||| ||||||||||||
Sbjct 75313 TTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATG 75372
Query 23159 TACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGA 23218
|| || ||||| || || ||| ||||| ||||| || |||| | ||| || |
Sbjct 75373 TATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCAAACCTGCTGGGCCTTC 75432
Query 23219 ACACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCA 23278
|| ||| | | |||||||| |||||| || ||| | | ||||| || |
Sbjct 75433 ACCACACGCTTGACGCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCC 75492
Query 23279 CCGTAACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATGAGACTCCACATTGAGTC 23337
|| | || ||| ||| ||||| ||| | || |||||||| ||| ||| ||
Sbjct 75493 CCCCAGCACTCGTTCAGCCCGGGACATT-CGTCTGGACACATTAGAGACCAGTCCTGGTT 75551
Query 23338 ATTTTCAACGCGTCT-CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGG 23396
| | || || | ||| ||| || | || || ||||| | ||||||||| || || | ||
Sbjct 75552 ACTCTCCAC-CCTCTCCATGAACAAGTCAGGGATCCACATAGCGTAGAAAAGGTCTCTGG 75610
Query 23397 CGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCAT 23456
| | | ||||||||| || |||||||| ||||| |||| ||||| || | || | ||
Sbjct 75611 CTCTCTGCTCCTCTTTTCCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAAT 75670
Query 23457 GCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGT 23516
|||| || || ||||| | ||| || || || || ||||| || || ||||| || || |
Sbjct 75671 GCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCACAT 75730
Query 23517 AACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTA 23576
| || || ||||||||||| ||||| ||||| || || || || ||||| |||
Sbjct 75731 AGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGG 75790
Query 23577 CGCCCGCCA---CACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTC 23633
||| || | ||| || | | || | | | ||| | ||| || ||||
Sbjct 75791 TGCCAGCGATGTAACT---TCCCGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTC 75847
Query 23634 CGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGT 23693
| |||| || || || | |||||| |||||||| ||||| || ||||||||||||||||
Sbjct 75848 CAGCCGACTTGGAGATGAGCGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGT 75907
Query 23694 CCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGA 23753
| || || | |||| || ||| || |||| || | || ||| | || |
Sbjct 75908 CATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAA 75967
Query 23754 ACAGTGTCGGGCTGGCGTGCGTAAAGTATCCA-TTC---GACATTAGATTGTACGTGTCG 23809
| ||||||||| ||| || || || ||| ||| |||| || ||||| || ||
Sbjct 75968 AGAGTGTCGGGGAGGCATGGGTGAA----CCACTTCTCTGACAGCAGGTTGTAGGTTTCA 76023
Query 23810 ATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGA 23869
|| || |||||||| || | || || || | | || | ||| | ||||| ||
Sbjct 76024 ATCGCTGCATCAATATCTGTTTGATGGATCCCCACAGAAACCCTCATGAGCATGTGCTGC 76083
Query 23870 GGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAAT 23929
|||| |||| || |||||| || || ||||| || || || | || ||||||||
Sbjct 76084 GGTCGCTCGGCCACTTTGCCGTTGATCTTCAACAGGTAGGACCGCTCCAGGGTTTTAAAG 76143
Query 23930 CCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGT 23984
|| || | | || ||| || || || | | ||||||||| |||| ||||
Sbjct 76144 CCGAAGAAATTGTACGAAAAATCGCGGTCATATATTATGGCCGAGTTCAGGCGGT 76198
>seq681
Length=269650
Score = 129 bits (142), Expect = 5e-25
Identities = 124/159 (78%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 23340 TTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399
|||| || ||| ||||||| || || || ||||| | |||| ||||||| || | ||| |
Sbjct 110140 TTTCCACTCGTTTCATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCC 110081
Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459
| |||||||||||| ||||||||||||| |||| || | ||||| || | |||||
Sbjct 110080 TCTGCTCCTCTTTGCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCC 110021
Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTAT 23498
||||||| ||||| || ||||| || || ||||||| ||
Sbjct 110020 ACGGCTCCAGGTACACAGCAAAGGCTCCAGGTCTCTGAT 109982
Score = 118 bits (130), Expect = 9e-22
Identities = 121/158 (77%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 23047 CACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGT 23106
|||||| |||||| ||||||||||||||| || || || |||||||| | || || ||
Sbjct 110572 CACCTCATCTTTGCTCGTGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGT 110513
Query 23107 GCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGT 23166
||||| || ||||||||| || | ||||| | ||||||||||||||||| || ||
Sbjct 110512 GCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGT 110453
Query 23167 GCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACA 23204
||| || || || ||||||||||| || |||||
Sbjct 110452 GCCGGTTTCTGTTTGAGACTCGATGATGGCGTACCACA 110415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445575099349440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |