Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq854 450 1e-121 seq681 129 5e-25 >seq854 Length=240782 Score = 450 bits (498), Expect = 1e-121 Identities = 1069/1615 (66%), Gaps = 35/1615 (2%) Strand=Plus/Plus Query 22388 ATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGA 22447 |||| | |||||| || ||||||||||| || | | |||| ||||||| || Sbjct 74601 ATGAGCTTATTTTTCATGTCCTCGTTCCACAACCCCCTCTCCGTCAGGTCTTTGAGGAGG 74660 Query 22448 TGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTG 22507 ||| |||| || | || ||||| ||||||| ||| | ||| ||| |||||| ||| Sbjct 74661 TGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTG 74720 Query 22508 AACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGC 22567 | | ||||| ||| || ||||| ||||| ||||| ||||| || ||||| |||||||| Sbjct 74721 TAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATCGGG 74780 Query 22568 GCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAG 22627 || || || || ||| |||| ||||||||| | ||||| ||| |||| | |||| Sbjct 74781 GCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTCCAG 74840 Query 22628 TCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTC 22687 ||| |||| |||| |||||| || |||||||| ||||| || | | ||| || Sbjct 74841 TCCAACAGGTCGGTGGGCGTC---TTCTCCCACATGTCGTACTGAAGGATGCCCTTGCTG 74897 Query 22688 GCCGGGCTGCCTTCGTACGTTTCGTACGGACC----ATATATCGCGGCAAGTTCGCAGCT 22743 ||||| ||||||||| ||||||||||| || Sbjct 74898 ACCGGGGAGCCTTCGTAGGTTTCGTACGGCCCGAGCNNNNNNNNNNNNNNNNNNNNNNNN 74957 Query 22744 CGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCA-ATTCGGCGGCGG 22802 | || |||| || || ||||||||||| | |||||| | | | | | Sbjct 74958 NNNNNNGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAG-CTT 75016 Query 22803 CGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTA 22862 || ||||||| |||| |||||| | | ||| ||||| |||| |||||| || || | Sbjct 75017 CGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGA 75076 Query 22863 TACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCG 22922 | || || || | || | || ||| | || ||||||| ||||| |||| Sbjct 75077 TTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACTGGATAGTAATTAA 75136 Query 22923 AATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAA 22982 ||| || | ||||||||||| || || | || || | | || Sbjct 75137 TATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAA 75196 Query 22983 AGTCGTAAACGCCCGATT----GTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTG 23038 |||| ||| | ||| | || || || |||||| |||| ||||| ||||| Sbjct 75197 AGTC--AAAAGTCCGCTCAGCGGTG--ACGTACATGTTGAGTGCGACGGAGGCCAGATTA 75252 Query 23039 CATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACAC 23098 || || || |||||||| || ||||| || |||||||| || ||||||||||| | | Sbjct 75253 CAAACNGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTC 75312 Query 23099 TTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATG 23158 || || ||||||| ||| ||||||||| || | |||||| | ||| |||||||||||| Sbjct 75313 TTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATG 75372 Query 23159 TACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGA 23218 || || ||||| || || ||| ||||| ||||| || |||| | ||| || | Sbjct 75373 TATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCAAACCTGCTGGGCCTTC 75432 Query 23219 ACACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCA 23278 || ||| | | |||||||| |||||| || ||| | | ||||| || | Sbjct 75433 ACCACACGCTTGACGCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCC 75492 Query 23279 CCGTAACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATGAGACTCCACATTGAGTC 23337 || | || ||| ||| ||||| ||| | || |||||||| ||| ||| || Sbjct 75493 CCCCAGCACTCGTTCAGCCCGGGACATT-CGTCTGGACACATTAGAGACCAGTCCTGGTT 75551 Query 23338 ATTTTCAACGCGTCT-CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGG 23396 | | || || | ||| ||| || | || || ||||| | ||||||||| || || | || Sbjct 75552 ACTCTCCAC-CCTCTCCATGAACAAGTCAGGGATCCACATAGCGTAGAAAAGGTCTCTGG 75610 Query 23397 CGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCAT 23456 | | | ||||||||| || |||||||| ||||| |||| ||||| || | || | || Sbjct 75611 CTCTCTGCTCCTCTTTTCCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAAT 75670 Query 23457 GCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGT 23516 |||| || || ||||| | ||| || || || || ||||| || || ||||| || || | Sbjct 75671 GCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCACAT 75730 Query 23517 AACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTA 23576 | || || ||||||||||| ||||| ||||| || || || || ||||| ||| Sbjct 75731 AGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGG 75790 Query 23577 CGCCCGCCA---CACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTC 23633 ||| || | ||| || | | || | | | ||| | ||| || |||| Sbjct 75791 TGCCAGCGATGTAACT---TCCCGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTC 75847 Query 23634 CGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGT 23693 | |||| || || || | |||||| |||||||| ||||| || |||||||||||||||| Sbjct 75848 CAGCCGACTTGGAGATGAGCGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGT 75907 Query 23694 CCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGA 23753 | || || | |||| || ||| || |||| || | || ||| | || | Sbjct 75908 CATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAA 75967 Query 23754 ACAGTGTCGGGCTGGCGTGCGTAAAGTATCCA-TTC---GACATTAGATTGTACGTGTCG 23809 | ||||||||| ||| || || || ||| ||| |||| || ||||| || || Sbjct 75968 AGAGTGTCGGGGAGGCATGGGTGAA----CCACTTCTCTGACAGCAGGTTGTAGGTTTCA 76023 Query 23810 ATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGA 23869 || || |||||||| || | || || || | | || | ||| | ||||| || Sbjct 76024 ATCGCTGCATCAATATCTGTTTGATGGATCCCCACAGAAACCCTCATGAGCATGTGCTGC 76083 Query 23870 GGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAAT 23929 |||| |||| || |||||| || || ||||| || || || | || |||||||| Sbjct 76084 GGTCGCTCGGCCACTTTGCCGTTGATCTTCAACAGGTAGGACCGCTCCAGGGTTTTAAAG 76143 Query 23930 CCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGT 23984 || || | | || ||| || || || | | ||||||||| |||| |||| Sbjct 76144 CCGAAGAAATTGTACGAAAAATCGCGGTCATATATTATGGCCGAGTTCAGGCGGT 76198 >seq681 Length=269650 Score = 129 bits (142), Expect = 5e-25 Identities = 124/159 (78%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 23340 TTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399 |||| || ||| ||||||| || || || ||||| | |||| ||||||| || | ||| | Sbjct 110140 TTTCCACTCGTTTCATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCC 110081 Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459 | |||||||||||| ||||||||||||| |||| || | ||||| || | ||||| Sbjct 110080 TCTGCTCCTCTTTGCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCC 110021 Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTAT 23498 ||||||| ||||| || ||||| || || ||||||| || Sbjct 110020 ACGGCTCCAGGTACACAGCAAAGGCTCCAGGTCTCTGAT 109982 Score = 118 bits (130), Expect = 9e-22 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 23047 CACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGT 23106 |||||| |||||| ||||||||||||||| || || || |||||||| | || || || Sbjct 110572 CACCTCATCTTTGCTCGTGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGT 110513 Query 23107 GCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGT 23166 ||||| || ||||||||| || | ||||| | ||||||||||||||||| || || Sbjct 110512 GCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGT 110453 Query 23167 GCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACA 23204 ||| || || || ||||||||||| || ||||| Sbjct 110452 GCCGGTTTCTGTTTGAGACTCGATGATGGCGTACCACA 110415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445575099349440