Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq854 138 1e-27 >seq854 Length=240782 Score = 138 bits (152), Expect = 1e-27 Identities = 381/579 (66%), Gaps = 4/579 (1%) Strand=Plus/Plus Query 37969 CCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATA 38028 || ||||||||| |||||||||||||||||| || | | | || || | ||||| Sbjct 75511 CCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTCCATG 75570 Query 38029 AATAAATCAGGTACCCATAATGCAGTAAATAAA-TCTTTGGTTCTATATTCTTCGTTCCC 38087 || || ||||| | ||| | || ||| | || ||| ||| ||| | || || || || Sbjct 75571 AACAAGTCAGGGATCCACATAGC-GTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCC 75629 Query 38088 TACATTCTTTCTTAAGCTT-AGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAA 38146 ||||| ||| | || || || || |||||||| | ||||| ||||| | || | Sbjct 75630 AGTGTTCTT-CTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACA 75688 Query 38147 TCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTAT 38206 | | | || || || || || | || ||||| | | ||| | | ||||| || | Sbjct 75689 TGGCGAAAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGT 75748 Query 38207 ATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTAC 38266 | | ||| | ||| || || | ||||| || ||||| || | || | || ||| | | Sbjct 75749 AAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACTTC 75808 Query 38267 CCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAG 38326 || ||| || || || | | || || ||||| || || || || || | | Sbjct 75809 CCGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGACTTGGAGATGAGCG 75868 Query 38327 CGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAA 38386 |||| ||||| | ||| ||| | || || || || ||||||||||| || | || | | Sbjct 75869 CGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGA 75928 Query 38387 AACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTA 38446 | || || |||| || ||| || || || ||||| | ||| || || ||||| Sbjct 75929 AGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAAAGAGTGTCGGGGAGGCATGGG 75988 Query 38447 TGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGT 38506 ||||||| || || |||| || || ||||| || | |||| ||||| | Sbjct 75989 TGAACCACTTCTCTGACAGCAGGTTGTAGGTTTCAATCGCTGCATCAATATCTGTTTGAT 76048 Query 38507 GAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTC 38545 | || || | ||| |||||||| ||||| || || |||| Sbjct 76049 GGATCCCCACAGAAACCCTCATGAGCATGTGCTGCGGTC 76087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468323732582080