Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq854 556 2e-153 seq681 120 4e-22 >seq854 Length=240782 Score = 556 bits (616), Expect = 2e-153 Identities = 1077/1581 (68%), Gaps = 22/1581 (1%) Strand=Plus/Plus Query 65476 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG 65535 |||| || ||||| |||||||||| | || ||| || ||||| |||| || || | Sbjct 74972 CGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCTTTCGAACG 75031 Query 65536 GATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTAT 65595 | ||| | ||| || || ||||| || || || || ||||| || || || || || | Sbjct 75032 GGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGCCTGT 75091 Query 65596 GTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 65655 | | ||| || || | |||||||| || | ||||| |||||||||||||| || || | Sbjct 75092 GGCGCTTGTTGGACTTCTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATCTTGT 75151 Query 65656 TGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCT 65712 | | ||| |||||| ||| ||| |||| | ||||| |||| ||||| |||| Sbjct 75152 TCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAAGTCCGCT 75211 Query 65713 CATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAG 65772 || | | || ||||||| | ||| || || |||||||||||||| |||||||| | | Sbjct 75212 CAGCGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACNGCTACCTC-GTCG 75270 Query 65773 CATC-CGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTT 65831 | | | |||| | || || ||||| ||||| || | ||||||||| || | ||| Sbjct 75271 CTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTC 75330 Query 65832 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 65891 || || || ||||| | || || ||||| || || || ||| ||||||| || |||||| Sbjct 75331 TGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTCA 75390 Query 65892 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTC 65951 |||| || ||||| || || | ||| || | ||||| | | | ||| | Sbjct 75391 GTCTGGGACTCTATGATGGCATGCCAAACCTGCTGGGCCTTCACCACACGCTTGACGCGG 75450 Query 65952 TTTTCTCTTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 66009 |||| | ||||| | ||||| | || || ||||| || ||||| | || || Sbjct 75451 CCTTCTTTCTCGTATTTGGTGTAGAGCTTC--TCAAACTCCTCCCCCCAGCACTCGTTCA 75508 Query 66010 ATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 66069 || |||||||| || |||||||| | ||||| || || | || ||| | | || Sbjct 75509 GCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTCCA 75568 Query 66070 TAAAGAGATCAGGAATCCAAAGAGC-TATAAATAAATCTCTGGTTCTATGTTCCTCGTTT 66128 | || | ||||| ||||| | ||| || ||| | ||||||| ||| || ||||| ||| Sbjct 75569 TGAACAAGTCAGGGATCCACATAGCGTAGAAA-AGGTCTCTGGCTCTCTGCTCCTCTTTT 75627 Query 66129 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTAT 66188 || || ||||| || | || ||||| | | ||||| ||||||| ||||||| ||| Sbjct 75628 CCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTAC 75687 Query 66189 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 66248 ||||| | | | ||||||| |||||||| ||||| || | || | |||||||| || Sbjct 75688 ATGGCGAAAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTG 75747 Query 66249 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTT 66308 |||||||||| ||| || | || |||||||| | |||||||| || | ||| || ||| Sbjct 75748 TAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACTT 75807 Query 66309 CCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 66368 || | | | || || | | | ||| ||||| || ||| || ||||| | Sbjct 75808 CCCGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGACTTGGAGATGAGC 75867 Query 66369 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 66428 ||||| |||| | ||| ||||| |||||||| || || |||||| ||||| || || Sbjct 75868 GCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAGG 75927 Query 66429 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 66488 || ||||| |||| || | | | || || |||||||| | || || || || || Sbjct 75928 AAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAAAGAGTGTCGGGGAGGCATGG 75987 Query 66489 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGA 66548 || ||||| || || || || || ||||| || ||||| |||| || ||||| |||| Sbjct 75988 GTGAACCACTTCTCTGACAGCAGGTTGTAGGTTTCAATCGCTGCATCAATATCTGTTTGA 76047 Query 66549 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 66608 || || || || | || | ||| | ||||||||| |||| || | | ||| ||| Sbjct 76048 TGGATCCCCACAGAAACCCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTG 76107 Query 66609 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 66668 || ||||||| |||||| |||| |||||||| || || | ||||| ||||| || Sbjct 76108 ATCTTCAACAGGTAGGACCGCTCCAGGGTTTTAAAGCCGAAGAAATTGTACGAAAAATCG 76167 Query 66669 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTA 66728 || || || || || ||||||| || || || | | | || | || | || Sbjct 76168 CGGTCATATATTATGGCCGAGTTCAGGCGGTCTTTGTTCTGGAGGACGATGTCAAGCGT- 76226 Query 66729 ATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATC 66787 | ||| || | || ||||| || | |||| || || | |||||| | | || Sbjct 76227 CTCCTTGGAGACCATGGGAGAGTGACGCTTATTTAGTGGGTTTATGTAGTTGTACAGGTC 76286 Query 66788 CTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCT 66847 ||||||||| ||||| || | || ||||| || ||||| || ||||| ||||| || | Sbjct 76287 CTCCATCACGTCACTGAACACCTTCTTTGTCTCCTTGTGCAGGTTTGAGACGGCGATCCG 76346 Query 66848 AGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGC 66907 || || | ||||| || || || |||| || || ||| || | | | Sbjct 76347 TGCAGCGAGGATGGCGTAGTCAGGGTGTTTGGTGGTCAGAGTAGCAGAGA---------C 76397 Query 66908 CAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGC 66967 || ||||| | || || || || |||||||| || | || ||||| |||||||| | Sbjct 76398 CAAGGTGTCGAGCTCCACNGTGGTGACTCCATTGTACAAACCCTGGATCACCTTCATGGT 76457 Query 66968 TATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGA 67027 || | || || | | |||| ||||| ||| || || | || || ||||| Sbjct 76458 AATCTGGGCTGGGTCCACAAAGTCAGCGTTTAGGCCGTAGCACAGCTTCTGGATGCGAGA 76517 Query 67028 TGTGATTTTATCAAACATGAC 67048 ||||||||||| |||||||| Sbjct 76518 GGTGATTTTATCGAACATGAC 76538 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965 |||| ||||| || ||||| || ||||||||| ||| | || ||||| || ||||| | Sbjct 74316 TCCAGCCGTAGAAGTGCATGCTGGTTAGTTTGCCATAGTTGGGCTCTGCGATGTGGATGT 74375 Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025 ||| ||| || || || ||||||||||| || | ||| || ||||| || ||||| || | Sbjct 74376 TCAGAGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCTGCCATCTTGATGATGGTTT 74435 Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076 | || | |||||||| | ||||||||| | |||| | || | ||||| Sbjct 74436 TCTGGGAGATTTCCCACACAGTTTTATACAGCTGCTTCACGTCGTTTGGAA 74486 >seq681 Length=269650 Score = 120 bits (132), Expect = 4e-22 Identities = 126/166 (76%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 ||||||| | ||| || || |||||||||||||| || ||||| || | || || | | Sbjct 108804 CACTAAAGACTTTCTTGGTCTCTTTGTGTAGATTGGACACGGCGATCCGTGCAGCCAGGA 108745 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 |||||||||| |||| || || || ||||||||| | || |||||||||||||||| Sbjct 108744 TGGCATAATCAGGATATTTGGTGGTGAGAGTGGCTGCCGTCTCTGCTGCCAGAGTGTCCA 108685 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 || || || || |||||| | || | || ||||| |||||||| Sbjct 108684 GCTCCACTGTGGTGACTCCACTGTACAGGCCCTGGATCACCTTCAT 108639 Score = 104 bits (114), Expect = 3e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 66059 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATG 66118 |||||||||||||||||| || || ||||| | ||| | || | |||||||| || || Sbjct 110136 CACTCGTTTCATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCCTCTG 110077 Query 66119 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGG 66178 ||||| || || || |||||||| || || |||||||| | | ||| |||||||||| Sbjct 110076 CTCCTCTTTGCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCCACGG 110017 Query 66179 TTCCAAGTATATGGCCATAACTCCAGG 66205 |||| ||| | || | ||||||| Sbjct 110016 CTCCAGGTACACAGCAAAGGCTCCAGG 109990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657890345142880