Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq854 159 5e-34 seq681 87.8 3e-12 seq746 86.0 9e-12 >seq854 Length=240782 Score = 159 bits (176), Expect = 5e-34 Identities = 377/564 (67%), Gaps = 18/564 (3%) Strand=Plus/Minus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 || || |||||| ||| ||| || || || ||||| ||| | ||||| | |||| Sbjct 75791 ACCAATGGCAACTCCAATGGGCTTGTCCCCATGCTGAGAGTTTACAACAACACCGCACGC 75732 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 || || ||||| || || || |||| || ||| | ||| | ||| ||||||| ||| Sbjct 75731 TATGTGGACCAGGGTGGAAACAAGAGGCCTGGGGCTTTCGCCATGTACCTGGAACCCTGG 75672 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 || | || | |||||||| | ||| || || ||| |||| || ||| || Sbjct 75671 CATTCCGATATATTTGACTTCCTGGAGTTGAAGAAGAACACTGGAAAAGAGGAGCAGAGA 75612 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046 ||||| ||| | || || || | ||| | || || ||||||||| || | || | || Sbjct 75611 GCCAGAGACCTTTTCTACGCTATGTGGATCCCTGACTTGTTCATGGAGAGGGTGGA-GA- 75554 Query 97047 GGTGGCTA---CTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103 || | | |||| |||||||| || ||| | ||||| ||| ||| |||||| Sbjct 75553 -GTAACCAGGACTGGTCTCTAATGTGTCCAGACGAATGTCCCGGGCTGAACGAGTGCTGG 75495 Query 97104 GGCGAAGAGTTTGAGGCCAAG---TACACGGCCTACGAGCAAGAGGGCCGATACGTGAGA 97160 || || ||||||||| ||| ||||| |||||| |||| ||||| ||| | Sbjct 75494 GGGGAGGAGTTTGAG---AAGCTCTACACCAAATACGAGAAAGAAGGCCG---CGTCAAG 75441 Query 97161 CGAGTCG---ATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGA 97217 || || | | || | | | ||| | |||||| | | | ||| || || || Sbjct 75440 CGTGTGGTGAAGGCCCAGCAGGTTTGGCATGCCATCATAGAGTCCCAGACTGAAACCGGC 75381 Query 97218 ACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGC 97277 ||||| ||||| |||||||| ||| || ||| | || |||||||| | | ||||| Sbjct 75380 ACTCCATACATGCTCTACAAAGATGCCTGCAATAGGAAGAGCAACCAGCAGAATCTGGGC 75321 Query 97278 ACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACG 97337 ||||||||| || |||||| ||||| |||||||| || ||| || |||||| Sbjct 75320 ACCATCAAGAGCAGCAATCTATGCACAGAAATTGTGGAATACACCAGCAGCGACGAGGTA 75261 Query 97338 GCAGTTTGCGTTCTGGCATCGGTC 97361 || ||||| |||||| || ||| Sbjct 75260 GCNGTTTGTAATCTGGCCTCCGTC 75237 >seq681 Length=269650 Score = 87.8 bits (96), Expect = 3e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238 |||||| | |||||| | | |||| ||| || || || || ||||| ||||||||| Sbjct 110414 CTGTGGTACGCCATCATCGAGTCTCAAACAGAAACCGGCACACCATACATGCTCTACAAG 110473 Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298 || || || | || |||||||| | || ||||||||||||| | ||||||| Sbjct 110474 GACGCCTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATCCAGCAATCTG 110533 Query 97299 TGCACGGAAATTGTAGAGTAC 97319 ||||| || |||||||||||| Sbjct 110534 TGCACAGAGATTGTAGAGTAC 110554 >seq746 Length=686128 Score = 86.0 bits (94), Expect = 9e-12 Identities = 118/160 (74%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 69962 GGATCGACCAATGCCAAAGAGCTGAGCCGA-AAGGGTGTACACATTTGGAGCGGCAACAG 70020 ||||| || |||||||||||||| | || || || ||| | |||||| | |||| | Sbjct 480889 GGATCCACAAATGCCAAAGAGCTCT-CAGAGAAAGGAGTAAAGATTTGGGAAGCCAACGG 480831 Query 70021 TAGTCGAAGCGTTT-TGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGC 70079 | | | || ||| |||| || || |||||||| || | ||||| |||||||| | Sbjct 480830 TTCTAGG-GCTTTTCTGGACAATCTGGGGCTCACCGACCGAGAGGAGGGAGATCTGGGCC 480772 Query 70080 CAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTA 70119 | |||||||| |||||||||||||||| || || |||| Sbjct 480771 CTGTGTACGGGTTCCAGTGGAGGCACTTTGGTGCCGAGTA 480732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740741174444320