Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq746 132 3e-26 >seq746 Length=686128 Score = 132 bits (146), Expect = 3e-26 Identities = 141/182 (77%), Gaps = 3/182 (2%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||||| ||||||||| || || || | ||||||||||||||||||||| || || || || Sbjct 480722 CATGTTCGTGTACTCGGCACCAAAGTGCCTCCACTGGAACCCGTACACAGGGCCCAGATC 480781 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCC-TCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 ||| || || | || | |||||| || |||| ||| | || ||||| ||||| | Sbjct 480782 TCCCTCCTCTCGGT-CGGTGAGCCCCAGATTGTCCAGAAAAGCCCTAGAACCGTTGGCTT 480840 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 25951 |||| |||||||| || ||||| ||||||||||||| |||||||| || ||| || | | Sbjct 480841 CCCAAATCTTTACTCCTTTCTCTGAGAGCTCTTTGGCATTTGTGGATCC-CTGCCGCAAC 480899 Query 25952 AC 25953 || Sbjct 480900 AC 480901 Score = 113 bits (124), Expect = 3e-20 Identities = 114/147 (78%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| || || || |||||||||||||| ||||| ||||||| ||||| Sbjct 480291 GCAATCATGTAGGTCAGAAGTGCATAGCTGGCGATGTTGAAGGGCACCCCGAGGCCCATA 480350 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 | ||||||| | |||||| ||||| ||||| ||||| |||| | |||||| ||||| || Sbjct 480351 T-CCCCCGAGCGCTGGTACAGCTGGCACGACAGCTCGCCGTCACACACGTAGAACTGGCA 480409 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTAT 25652 || | || ||| || || ||||| || Sbjct 480410 CAGAGCGTGGCAGGGTGGCAGAGCCAT 480436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339995279200236