Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq854 551 7e-152 seq681 114 2e-20 seq1534 105 8e-18 >seq854 Length=240782 Score = 551 bits (610), Expect = 7e-152 Identities = 1076/1581 (68%), Gaps = 22/1581 (1%) Strand=Plus/Plus Query 62632 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG 62691 |||| || ||||| |||||||||| | || ||| || ||||| |||| || || | Sbjct 74972 CGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCTTTCGAACG 75031 Query 62692 GATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTAT 62751 | ||| | ||| || || ||||| || || || || ||||| || || || || || | Sbjct 75032 GGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGCCTGT 75091 Query 62752 GTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 62811 | | ||| || || | |||||||| || | ||||| |||||||||||||| || || | Sbjct 75092 GGCGCTTGTTGGACTTCTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATCTTGT 75151 Query 62812 TGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCC 62868 | | ||| |||||| ||| ||| |||| | ||||| |||| ||||| ||| Sbjct 75152 TCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAAGTCCGCT 75211 Query 62869 CATCTATTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAG 62928 || | | || ||||||| | || || || |||||||||||||| |||||||| | | Sbjct 75212 CAGCGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACNGCTACCTC-GTCG 75270 Query 62929 CATC-CGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTT 62987 | | | |||| | || || ||||| ||||| || | |||||| || || | ||| Sbjct 75271 CTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTC 75330 Query 62988 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 63047 || || || ||||| | || || ||||| || || || ||| ||||||| || |||||| Sbjct 75331 TGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTCA 75390 Query 63048 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTC 63107 |||| || ||||| || || | ||| || | ||||| | | | ||| | Sbjct 75391 GTCTGGGACTCTATGATGGCATGCCAAACCTGCTGGGCCTTCACCACACGCTTGACGCGG 75450 Query 63108 CTTTCTCTTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63165 | |||| | ||||| | ||||| | || || ||||| || ||||| | || || Sbjct 75451 CCTTCTTTCTCGTATTTGGTGTAGAGCTTC--TCAAACTCCTCCCCCCAGCACTCGTTCA 75508 Query 63166 ATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63225 || |||||||| || |||||||| | ||||| || || | || ||| | | || Sbjct 75509 GCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTCCA 75568 Query 63226 TAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63284 | || | ||||| ||||| | ||| || ||| || ||||||| ||| || ||||| ||| Sbjct 75569 TGAACAAGTCAGGGATCCACATAGCGTAGAAA-AGGTCTCTGGCTCTCTGCTCCTCTTTT 75627 Query 63285 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63344 || || ||||| || | || ||||| | | ||||| |||||||| ||||||| ||| Sbjct 75628 CCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTAC 75687 Query 63345 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63404 ||||| | | | ||||||| |||||||| ||||| || | || | |||||||| || Sbjct 75688 ATGGCGAAAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTG 75747 Query 63405 TAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTT 63464 |||||||||| ||| || | || || || || | |||||||| || | ||| || ||| Sbjct 75748 TAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACTT 75807 Query 63465 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63524 || | | | || || | | | ||| ||||| || ||| || ||||| | Sbjct 75808 CCCGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGACTTGGAGATGAGC 75867 Query 63525 GCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGA 63584 ||||| |||| | ||||||||| || ||||| ||||| ||||| ||||| || || Sbjct 75868 GCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAGG 75927 Query 63585 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 63644 || ||||| |||| || | | | || || |||||||| | || || || || || Sbjct 75928 AAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAAAGAGTGTCGGGGAGGCATGG 75987 Query 63645 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGA 63704 || ||||| || || || || || ||||| || ||||| |||| || ||||| |||| Sbjct 75988 GTGAACCACTTCTCTGACAGCAGGTTGTAGGTTTCAATCGCTGCATCAATATCTGTTTGA 76047 Query 63705 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 63764 || || || || | || | ||| | ||||||||| |||| || | | ||| ||| Sbjct 76048 TGGATCCCCACAGAAACCCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTG 76107 Query 63765 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 63824 || ||||||| |||||| |||| |||||||| || || | ||||| ||||| || Sbjct 76108 ATCTTCAACAGGTAGGACCGCTCCAGGGTTTTAAAGCCGAAGAAATTGTACGAAAAATCG 76167 Query 63825 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTG 63884 || || || || || ||||||| || || || | | | || || || | || Sbjct 76168 CGGTCATATATTATGGCCGAGTTCAGGCGGTCTTTGTTCTGGAGGACGATGTCAAGCGT- 76226 Query 63885 ATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 63943 | ||| || | || ||||| || | |||| || || | |||||| | | || Sbjct 76227 CTCCTTGGAGACCATGGGAGAGTGACGCTTATTTAGTGGGTTTATGTAGTTGTACAGGTC 76286 Query 63944 CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCT 64003 ||||||||| ||||| || | || ||||| |||||||| || ||||| ||||| || | Sbjct 76287 CTCCATCACGTCACTGAACACCTTCTTTGTCTCCTTGTGCAGGTTTGAGACGGCGATCCG 76346 Query 64004 GGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGC 64063 || || || ||||| || || || |||| || || ||| || | | | Sbjct 76347 TGCAGCGAGGATGGCGTAGTCAGGGTGTTTGGTGGTCAGAGTAGCAGAGA---------C 76397 Query 64064 CAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATAGC 64123 || ||||| | || || || || |||||||| || | || || || |||||||| | Sbjct 76398 CAAGGTGTCGAGCTCCACNGTGGTGACTCCATTGTACAAACCCTGGATCACCTTCATGGT 76457 Query 64124 TATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAACATAATTTTCTAATACGAGA 64183 || | || || | | || | ||||| ||| || || | || || ||||| Sbjct 76458 AATCTGGGCTGGGTCCACAAAGTCAGCGTTTAGGCCGTAGCACAGCTTCTGGATGCGAGA 76517 Query 64184 CGTGATTTTATCAAACATGAC 64204 ||||||||||| |||||||| Sbjct 76518 GGTGATTTTATCGAACATGAC 76538 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121 |||| ||||| || ||||| || ||||||||| ||| | || ||||| || ||||| | Sbjct 74316 TCCAGCCGTAGAAGTGCATGCTGGTTAGTTTGCCATAGTTGGGCTCTGCGATGTGGATGT 74375 Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181 ||| ||| || || || ||||||||||| || | ||| || ||||| || ||||| || | Sbjct 74376 TCAGAGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCTGCCATCTTGATGATGGTTT 74435 Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62232 | || | |||||||| | ||||||||| | |||| | || | ||||| Sbjct 74436 TCTGGGAGATTTCCCACACAGTTTTATACAGCTGCTTCACGTCGTTTGGAA 74486 >seq681 Length=269650 Score = 114 bits (126), Expect = 2e-20 Identities = 125/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 63955 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 64014 ||||||| | ||| || || || ||||||||||| || ||||| || | || || || | Sbjct 108804 CACTAAAGACTTTCTTGGTCTCTTTGTGTAGATTGGACACGGCGATCCGTGCAGCCAGGA 108745 Query 64015 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64074 |||||||||| |||| || || || ||||||||| | || |||||||||||||||| Sbjct 108744 TGGCATAATCAGGATATTTGGTGGTGAGAGTGGCTGCCGTCTCTGCTGCCAGAGTGTCCA 108685 Query 64075 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64120 || || || || |||||| | || | || || || |||||||| Sbjct 108684 GCTCCACTGTGGTGACTCCACTGTACAGGCCCTGGATCACCTTCAT 108639 Score = 113 bits (124), Expect = 6e-20 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 63215 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 63274 |||||||||||||||||| || || ||||| | ||| | || |||||||||| || || Sbjct 110136 CACTCGTTTCATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCCTCTG 110077 Query 63275 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63334 ||||| || || || |||||||| || || |||||||| | | ||| ||||||||||| Sbjct 110076 CTCCTCTTTGCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCCACGG 110017 Query 63335 TTCCAAGTATATGGCCATAACTCCAGG 63361 |||| ||| | || | ||||||| Sbjct 110016 CTCCAGGTACACAGCAAAGGCTCCAGG 109990 >seq1534 Length=15379 Score = 105 bits (116), Expect = 8e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||||||||| || || || |||||||| || || || |||||||| ||||| | || | Sbjct 8667 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCCCTTTTCT 8726 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| || |||||||| || || ||||| ||||| || || || || |||||||||| Sbjct 8727 TCAGCCAGAAGATGGAAGCAAAGGACCCAGAGAAGAAAATACCCTCCACGGCAGCAAAGG 8786 Query 33446 C 33446 | Sbjct 8787 C 8787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622679862209120