Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq854 224 3e-53 seq681 91.5 4e-13 >seq854 Length=240782 Score = 224 bits (248), Expect = 3e-53 Identities = 616/929 (66%), Gaps = 24/929 (3%) Strand=Plus/Minus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | ||| || ||||| |||||||| | ||||| || | | | || Sbjct 76148 TTCGGCTTTAAAACCCTGGAGCGGTCCTACCTGTTGAAGATCAACGGCAAAGTGGCCGAG 76089 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 || |||||||| ||| | ||| | ||| || | || |||||| | ||| ||||||| Sbjct 76088 CGACCGCAGCACATGCTCATGAGGGTTTCTGTGGGGATCCATCAAACAGATATTGATGCA 76029 Query 363511 GCGATTGAAACATATAAGCTTCTA--AGTGCTCGTGTATTCACGCACGCCACGCCAACAA 363568 ||||||||||| || || || || || | ||| ||||| || ||| | || ||| Sbjct 76028 GCGATTGAAACCTACAACCTGCTGTCAGAGAA-GTGG-TTCACCCATGCCTCCCCGACAC 75971 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 | | ||||| || || | |||||| |||| ||||| || || ||||||| Sbjct 75970 TCTTTAATGCAGGTACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGG 75911 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | || ||||||||| || | |||||| || || | || || || || |||||| | Sbjct 75910 ATGACAGCATCGAGGGCATTTATGACACGCTGAAACAGTGCGCGCTCATCTCCAAGTCGG 75851 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGC-GG 363746 | || ||||| ||||| | || | | | | || | | |||||||| ||| || Sbjct 75850 CTGGAGGAATCGGTGTGGCCGTCAGCTGCATCAGATCTACGGGA-AGTTACAT-CGCTGG 75793 Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 ||| || |||| |||||||| || |||||||| | || | |||| || || | Sbjct 75792 CACCAATGGCAACTCCAATGGGCTTGTCCCCATGCTGAGAGTTTACAACAACACCGCACG 75733 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 || || |||||||||||| ||| | ||||| || || ||||| || || || Sbjct 75732 CTATGTGGACCAGGGTGGAAACAAGAGGCCTGGGGCTTTCGCCATGTACCTGGAACCCTG 75673 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 ||| ||||||| ||||| || || ||| | ||| ||||| ||||||||||| | | Sbjct 75672 GCATTCCGATATATTTGACTTCCTGGAGTTGAAGAAGAACACTGGAAAAGAGGAGCAGAG 75613 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 || | || || ||||| || | ||| | ||||| || ||| || | |||||| Sbjct 75612 AGCCAGAGACCTTTTCTACGCTATGTGGATCCCTGACTTGTTCATGGAGAGGGTGGAG-- 75555 Query 363987 AGGTA--AGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 || | || | ||||| || | || ||| |||||||||| || || ||| ||| Sbjct 75554 AGTAACCAGGACTGGTCTCTAATGTGTCCAGACGAATGTCCCGGGCTGAACGAGTGCTGG 75495 Query 364045 GGTGACGACTAT--GTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGT-AAG 364101 || || || | | | |||||| || ||| || || || ||| | | ||| ||| Sbjct 75494 GGGGAGGAGTTTGAGAAGCTCTACACCAAA--TACGA----GAAAGAAGGCCGCGTCAAG 75441 Query 364102 ---ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158 | || ||| || | ||| ||||||||| || || |||| ||| || || Sbjct 75440 CGTGTGGTGAAGGCCCAGCAGGTTTGGCATGCCATCATAGAGTCCCAGACTGAAACCGGC 75381 Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218 || || || ||| | ||||||||| | ||||| | ||| |||||||||| | || || Sbjct 75380 ACTCCATACATGCTCTACAAAGATGCCTGCAATAGGAAGAGCAACCAGCAGAATCTGGGC 75321 Query 364219 ACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACT 364278 || || || ||||| ||||| || || ||| | ||||||||| ||||||| Sbjct 75320 ACCATCAAGAGCAGCAATCTATGCACAGAAATTGTGGAATACACCAGCAGCGACGAGGTA 75261 Query 364279 GCCGTATGTAACCTTGCGTCGATCGCGCT 364307 || || ||||| || || || |||| || Sbjct 75260 GCNGTTTGTAATCTGGCCTCCGTCGCACT 75232 >seq681 Length=269650 Score = 91.5 bits (100), Expect = 4e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 364951 CAGAACATTCCAGGATTTCCA-GAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAAT 365009 ||| |||| |||||| ||| || || ||||||| | || |||||||| |||||||| Sbjct 111753 CAGGACAT-CCAGGAGATCCCCGATGACCTGAAGCAGCTGTATAAAACCGTGTGGGAAAT 111811 Query 365010 TTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCA 365069 ||| | || || | | ||||| || |||||||| |||| ||| ||||||||| Sbjct 111812 CTCCCAGAAGACCGTCCTCAAGATGGCAGCAGATCGCGGCGCTTACATCGATCAGAGCCA 111871 Query 365070 GTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTA 365129 |||| | ||| | ||| | |||| |||| || ||| || || |||||| || || Sbjct 111872 GTCGCTGAACATCCACATCGCAGAGCCGACCTACGGCAAACTGACCAGCATGCACTTTTA 111931 Query 365130 CGGGTGGAA 365138 ||| ||||| Sbjct 111932 CGGTTGGAA 111940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302780282447624