Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq81 98.7 9e-16 >seq81 Length=187384 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| | ||||| || | || || | || || ||| ||| | Sbjct 173176 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 173235 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || || ||||| ||||| |||||||| || || ||||| Sbjct 173236 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 173295 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | |||||||| || ||||||| | | | | || ||| || ||| Sbjct 173296 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 173355 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || || || || Sbjct 173356 ATCCAGAAGGAGTCCAC 173372 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| | ||||| || | || || | || || ||| ||| | Sbjct 173404 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 173463 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || || ||||| ||||| |||||||| || || ||||| Sbjct 173464 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 173523 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | |||||||| || ||||||| | | | | || ||| || ||| Sbjct 173524 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 173583 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || || || || Sbjct 173584 ATCCAGAAGGAGTCCAC 173600 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| | ||||| || | || || | || || ||| ||| | Sbjct 173632 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 173691 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || || ||||| ||||| |||||||| || || ||||| Sbjct 173692 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 173751 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | |||||||| || ||||||| | | | | || ||| || ||| Sbjct 173752 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 173811 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || || || || Sbjct 173812 ATCCAGAAGGAGTCCAC 173828 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | ||||||||||| | ||||| || | || || | || || ||| || Sbjct 172945 AACATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCC 173004 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 | |||||||| ||| | || || ||||| ||||| |||||||| || || ||| Sbjct 173005 AGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGAT 173064 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||||| ||||| | | |||||||| || ||||||| | | | | || ||| || Sbjct 173065 CAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTAC 173124 Query 24168 AACATTCAAAAAGAATCTAC 24187 ||||| || || || || || Sbjct 173125 AACATCCAGAAGGAGTCCAC 173144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429756105641460