Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq854 219 4e-52 seq681 113 4e-20 seq81 105 6e-18 seq1349 84.2 2e-11 >seq854 Length=240782 Score = 219 bits (242), Expect = 4e-52 Identities = 972/1521 (64%), Gaps = 60/1521 (4%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| | ||| ||||| |||| || || | || || | ||| ||| ||| | Sbjct 74667 TTGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCT 74726 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || | ||||||||| ||||||||||| || ||||| | ||||||||||| || | Sbjct 74727 TCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATCGGGGCTAAG 74786 Query 145178 A--ATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235 | | | || || | || ||||||||| ||| | |||||||||| ||| ||| Sbjct 74787 AGCAGACTG--TTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTCCAGTCCA 74844 Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295 | || || ||| || ||||||||||||||||| | ||||||| |||| | ||| Sbjct 74845 ACAGGTCGGTGGGCGTCTTCTCCCACATGTCGTACTGAAGGATGCCCTTGCTGACCGGGG 74904 Query 145296 TGCCTTGAAAGGAACTGTAACTGCCC---CAAGTTTTGGCGAGCTCGCAACTCGCCTCCA 145352 ||||| ||| ||| | |||| | Sbjct 74905 AGCCTTCGTAGGTTTCGTA-CGGCCCGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 74963 Query 145353 GAGCGC--CGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCT 145410 ||| || || | || || |||||| || || |||| || ||| ||||| ||| Sbjct 74964 GAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCT 75023 Query 145411 CTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGAT 145470 ||| |||| |||| || | || || ||||| | ||||| | || | || || Sbjct 75024 TTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTAT 75083 Query 145471 GGGCCGATGTTTCATGTTG-----CTCATCCTCGCCGACTCGATAGGATATCGATTACGG 145525 |||| || | ||||| |||| | ||| ||| ||||| | |||| Sbjct 75084 TGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACTGGATAGTA-----ATTAATA 75138 Query 145526 TCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTC-AAA 145584 || || || || ||||||||| || |||||||| || | || || | |||| ||| Sbjct 75139 TCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCACA-GCAGCTAGTTTTTGAAA 75197 Query 145585 GTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACA 145644 |||||| || | ||| || || | | |||| |||| || |||| |||||| Sbjct 75198 GTCAAA---AGTCCGCTCAGCGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACA 75254 Query 145645 AACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTT 145704 ||| || ||| ||| | | |||||| || || || | ||| | |||||| | || Sbjct 75255 AACNGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTT 75314 Query 145705 GATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTA 145764 |||||| |||||||| ||||| || || ||||| ||||| || || |||||||||||||| Sbjct 75315 GATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTA 75374 Query 145765 CGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGC---GCACG 145821 || ||| || || ||| | ||| | ||| | ||| | ||||| || Sbjct 75375 TGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCA---TGCCAAACCTGCTGGGCCTT 75431 Query 145822 CACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGA 145881 |||| ||| | |||||| |||| |||||||| ||||||||| ||||||| | Sbjct 75432 CACCACACGCTTGACGCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTC 75491 Query 145882 ACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTT 145941 || |||| ||| ||| |||||||| | || |||||||| || ||||| | ||| Sbjct 75492 CCCCCAGCACTCGTTCAGCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTT 75551 Query 145942 GGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC--GC 145999 | || | |||||| ||||| || || | ||||| ||||| | | ||| | || Sbjct 75552 ACTCTCCACCCTCTCCATGAACAAGTCAGGGATCCACATAGCGTAGAAAAGGTCTCTGGC 75611 Query 146000 GCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACTATAGATGTCCGCG 146059 || ||| ||||| || |||| |||||| | || | | | || || | Sbjct 75612 TCTCTGC--TCCTCTTTTCCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAA 75669 Query 146060 TGCCACGGTTCAATATAGACGGCGAGGGCTC----CTTTTCGTTTGCCACCCTGGTCCAC 146115 ||||| ||||| | || | ||||| || | | | | |||| |||||||||||||| Sbjct 75670 TGCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTTGTTT-CCACCCTGGTCCAC 75728 Query 146116 GTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTT 146175 | ||| | ||||||| | || | || |||||| | | || ||| ||| || Sbjct 75729 ATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATT 75788 Query 146176 CGT---AGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACC 146232 || || | | || | ||| || | | ||| || ||| |||| || Sbjct 75789 GGTGCCAGCGATGTAACT--TCCCG-TAGATCTGATGCAGCTGACGGCCACACCGATTCC 75845 Query 146233 GCC-GCCGTACTTGGATAT-AGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATG 146290 || |||| ||||||| || ||| ||||| | ||||| || || ||||| || ||| Sbjct 75846 TCCAGCCG-ACTTGGAGATGAGC-GCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATG 75903 Query 146291 CTATC--GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCG 146348 || || |||| ||| ||||||| ||||| | ||| ||| | | | || || | Sbjct 75904 CTGTCATCCTTC--ATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTG 75961 Query 146349 CCGAGAACAACGTCGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCCGATACGTT 146407 | || | |||||| || || || || || || || | || || || ||| Sbjct 75962 CATTAAAGAGTGTCGGGGAGGCATGGGTGAACCACTTCTCTG-ACAGCAGGTTGTAGGTT 76020 Query 146408 TCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGT 146467 || || || | | ||| || ||| || |||| || || | |||||||||||| Sbjct 76021 TCAATCGCTGCATCAATATCTGTTTGATGGATCCCCACAGAAACCCTCATGAGCATGTGC 76080 Query 146468 TGGGGCCGCTCCGCCACTTGATTGTCAATCTTTAACAAATAG--CCGTTCTCCAGGGTTT 146525 || || ||||| ||||||| || ||||| |||| ||| ||| ||||||||||| Sbjct 76081 TGCGGTCGCTCGGCCACTTTGCCGTTGATCTTCAACAGGTAGGACCG--CTCCAGGGTTT 76138 Query 146526 TGTATCCGAAAAATTTGTACG 146546 | | ||||| || ||||||| Sbjct 76139 TAAAGCCGAAGAAATTGTACG 76159 >seq681 Length=269650 Score = 113 bits (124), Expect = 4e-20 Identities = 92/112 (82%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727 |||| | ||| ||||| | ||||| |||||| |||||||||| ||||| || ||||| | Sbjct 110555 TGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGT 110496 Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTC 145779 | || ||||||||||| |||||||||||||||||||| ||| ||| || || Sbjct 110495 TGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCGGTTTC 110444 >seq81 Length=187384 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || |||||| || | || | ||| |||||||| || |||||||| ||| Sbjct 173858 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 173799 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || ||||||||||| || |||| | | |||||| || || || Sbjct 173798 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 173739 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||| | | ||| | || ||| ||| ||| | Sbjct 173738 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 173679 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || || || || |||||||| || ||||||||| Sbjct 173678 TCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 173631 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | || |||||| || | || | ||| |||||||| || |||||||| ||| Sbjct 173403 GCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 173344 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || ||||||||||| || |||| | | |||||| || || || Sbjct 173343 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 173284 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| || ||| | | ||| | || ||| ||| ||| | Sbjct 173283 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCAC 173224 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || || || || |||||||| || ||||||||| Sbjct 173223 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 173175 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | || |||||| || | || | ||| |||||||| || |||||||| ||| Sbjct 173631 GCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 173572 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || ||||||||||| || |||| | | |||||| || || || Sbjct 173571 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 173512 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| || ||| | | ||| | || ||| ||| ||| | Sbjct 173511 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCAC 173452 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || || || || |||||||| || ||||||||| Sbjct 173451 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 173403 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | || |||||| || | || | ||| |||||||| || |||||||| ||| Sbjct 173175 GCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 173116 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || ||||||||||| || |||| | | |||||| || || || Sbjct 173115 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 173056 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| || ||| | | ||| | || || ||| ||| | Sbjct 173055 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCAC 172996 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || || || || |||||||| || ||||||||| Sbjct 172995 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 172947 >seq1349 Length=1030505 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||| |||||| ||||| | || | ||| ||||||| || |||||||| || Sbjct 331231 CCACCGGACAAACGGAGCACAAGGTGGAGGGTGAACTCCTTCTGGATGTTGTAGTCAGAG 331290 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||| | ||||| ||||||||||| || |||| | ||||||||| || |||||| Sbjct 331291 AGGGTGTGGCCGTCCTGCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGATCAGGAGGG 331350 Query 131128 ATTCCTTCTTTGTC 131141 || || || || || Sbjct 331351 ATCCCCTCCTTATC 331364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471810235706880