Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq854 560 1e-154 seq681 120 4e-22 >seq854 Length=240782 Score = 560 bits (620), Expect = 1e-154 Identities = 1078/1581 (68%), Gaps = 22/1581 (1%) Strand=Plus/Plus Query 62487 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATG 62546 |||| || ||||| |||||||||| | || ||| || ||||| |||| || || | Sbjct 74972 CGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCTTTCGAACG 75031 Query 62547 GATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTAT 62606 | ||| | ||| || || ||||| || || || || ||||| || || || || || | Sbjct 75032 GGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGCCTGT 75091 Query 62607 GTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 62666 | | ||| || || | |||||||| || | ||||| |||||||||||||| || || | Sbjct 75092 GGCGCTTGTTGGACTTCTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATCTTGT 75151 Query 62667 TGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCC 62723 | | ||| |||||| ||| ||| |||| | ||||| |||| ||||| ||| Sbjct 75152 TCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAAGTCCGCT 75211 Query 62724 CATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAG 62783 || | | || ||||||| | ||| || || |||||||||||||| |||||||| | | Sbjct 75212 CAGCGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACNGCTACCTC-GTCG 75270 Query 62784 CATC-CGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTT 62842 | | | |||| | || || ||||| ||||| || | ||||||||| || | ||| Sbjct 75271 CTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTC 75330 Query 62843 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 62902 || || || ||||| | || || ||||| || || || ||| ||||||| || |||||| Sbjct 75331 TGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTCA 75390 Query 62903 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTC 62962 |||| || ||||| || || | ||| || | ||||| | | | ||| | Sbjct 75391 GTCTGGGACTCTATGATGGCATGCCAAACCTGCTGGGCCTTCACCACACGCTTGACGCGG 75450 Query 62963 TTTTCTCTTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63020 |||| | ||||| | ||||| | || || ||||| || ||||| | || || Sbjct 75451 CCTTCTTTCTCGTATTTGGTGTAGAGCTTC--TCAAACTCCTCCCCCCAGCACTCGTTCA 75508 Query 63021 GTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63080 | || |||||||| || |||||||| | ||||| || || | || ||| | | || Sbjct 75509 GCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTCCA 75568 Query 63081 TAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139 | || | ||||| ||||| | ||| || ||| || ||||||| ||| || ||||| ||| Sbjct 75569 TGAACAAGTCAGGGATCCACATAGCGTAGAAA-AGGTCTCTGGCTCTCTGCTCCTCTTTT 75627 Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199 || || ||||| || | || ||||| | | ||||| |||||||| ||||||| ||| Sbjct 75628 CCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTAC 75687 Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259 ||||| | | | ||||||| |||||||| ||||| || | || | |||||||| || Sbjct 75688 ATGGCGAAAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTG 75747 Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319 |||||||||| ||| || | || |||||||| | |||||||| || | ||| || ||| Sbjct 75748 TAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACTT 75807 Query 63320 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63379 || | | | || || | | | ||| ||||| || ||| || ||||| | Sbjct 75808 CCCGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGACTTGGAGATGAGC 75867 Query 63380 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 63439 ||||| |||| | ||| ||||| |||||||| || || |||||| ||||| || || Sbjct 75868 GCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAGG 75927 Query 63440 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGA 63499 || ||||| |||| || | | | || || |||||||| | || || || || || Sbjct 75928 AAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAAAGAGTGTCGGGGAGGCATGG 75987 Query 63500 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGA 63559 || ||||| || || || || || ||||| || ||||| |||| || ||||| |||| Sbjct 75988 GTGAACCACTTCTCTGACAGCAGGTTGTAGGTTTCAATCGCTGCATCAATATCTGTTTGA 76047 Query 63560 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 63619 || || || || | || | ||| | ||||||||| |||| || | | ||| ||| Sbjct 76048 TGGATCCCCACAGAAACCCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTG 76107 Query 63620 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 63679 || ||||||| |||||| |||| |||||||| || || | ||||| ||||| || Sbjct 76108 ATCTTCAACAGGTAGGACCGCTCCAGGGTTTTAAAGCCGAAGAAATTGTACGAAAAATCG 76167 Query 63680 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTA 63739 || || || || || ||||||| || || || | | | || | || | || Sbjct 76168 CGGTCATATATTATGGCCGAGTTCAGGCGGTCTTTGTTCTGGAGGACGATGTCAAGCGT- 76226 Query 63740 ATACTT-GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATC 63798 | ||| || | || ||| | || | |||| || || | |||||| | | || Sbjct 76227 CTCCTTGGAGACCATGGGAGAGTGACGCTTATTTAGTGGGTTTATGTAGTTGTACAGGTC 76286 Query 63799 CTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCT 63858 ||||||||| ||||| || | || ||||| || ||||| || ||||| ||||| || | Sbjct 76287 CTCCATCACGTCACTGAACACCTTCTTTGTCTCCTTGTGCAGGTTTGAGACGGCGATCCG 76346 Query 63859 AGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGC 63918 || || || ||||| || || || |||| || || ||| || | | | Sbjct 76347 TGCAGCGAGGATGGCGTAGTCAGGGTGTTTGGTGGTCAGAGTAGCAGAGA---------C 76397 Query 63919 CAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCATAGC 63978 || ||||| | || || || || || ||||| || | || ||||| |||||||| | Sbjct 76398 CAAGGTGTCGAGCTCCACNGTGGTGACTCCATTGTACAAACCCTGGATCACCTTCATGGT 76457 Query 63979 TATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGA 64038 || | || || | | |||| ||||| ||| || || | || || ||||| Sbjct 76458 AATCTGGGCTGGGTCCACAAAGTCAGCGTTTAGGCCGTAGCACAGCTTCTGGATGCGAGA 76517 Query 64039 TGTGATTTTATCAAACATGAC 64059 ||||||||||| |||||||| Sbjct 76518 GGTGATTTTATCGAACATGAC 76538 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976 |||| ||||| || ||||| || ||||||||| ||| | || ||||| || ||||| | Sbjct 74316 TCCAGCCGTAGAAGTGCATGCTGGTTAGTTTGCCATAGTTGGGCTCTGCGATGTGGATGT 74375 Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036 ||| ||| || || || ||||||||||| || | ||| || ||||| || || || || | Sbjct 74376 TCAGAGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCTGCCATCTTGATGATGGTTT 74435 Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62087 | || | |||||||| | ||||||||| | |||| | || | ||||| Sbjct 74436 TCTGGGAGATTTCCCACACAGTTTTATACAGCTGCTTCACGTCGTTTGGAA 74486 Score = 82.4 bits (90), Expect = 1e-10 Identities = 175/260 (67%), Gaps = 1/260 (0%) Strand=Plus/Plus Query 62098 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 62157 |||||||||||| | || || | | |||| || || || || ||||| || || Sbjct 74579 CTGAATGGATCCGTTGTGAGCGATGAGCTTATTTTTCATGTCCTCGTTCCACAACCCCCT 74638 Query 62158 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 62217 ||| || | || | ||||| || || || || | || || || || |||| || || Sbjct 74639 CTCCGTCAGGTCTTTGAGGAGGTGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCT 74698 Query 62218 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 62277 || ||||| || || ||||| || | ||| | |||||| || || |||| || || || Sbjct 74699 GCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGC 74758 Query 62278 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 62337 ||||| || || ||||| || || | | | ||| || || | |||| | ||| Sbjct 74759 GGTTGAGGCGGTGGGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGAT 74818 Query 62338 TTTATCTTTTAG-AGGTTCC 62356 ||| || ||||| || |||| Sbjct 74819 TTTTTCCTTTAGCAGCTTCC 74838 >seq681 Length=269650 Score = 120 bits (132), Expect = 4e-22 Identities = 126/166 (76%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 ||||||| | ||| || || |||||||||||||| || ||||| || | || || || | Sbjct 108804 CACTAAAGACTTTCTTGGTCTCTTTGTGTAGATTGGACACGGCGATCCGTGCAGCCAGGA 108745 Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929 |||||||||| |||| || || || ||||||||| | || |||||||||||||||| Sbjct 108744 TGGCATAATCAGGATATTTGGTGGTGAGAGTGGCTGCCGTCTCTGCTGCCAGAGTGTCCA 108685 Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 || || || || || ||| | || | || ||||| |||||||| Sbjct 108684 GCTCCACTGTGGTGACTCCACTGTACAGGCCCTGGATCACCTTCAT 108639 Score = 113 bits (124), Expect = 6e-20 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 63070 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 63129 |||||||||||||||||| || || ||||| | ||| | || |||||||||| || || Sbjct 110136 CACTCGTTTCATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCCTCTG 110077 Query 63130 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63189 ||||| || || || |||||||| || || |||||||| | | ||| ||||||||||| Sbjct 110076 CTCCTCTTTGCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCCACGG 110017 Query 63190 TTCCAAGTATATGGCCATAACTCCAGG 63216 |||| ||| | || | ||||||| Sbjct 110016 CTCCAGGTACACAGCAAAGGCTCCAGG 109990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633360076827200