Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq81 154 3e-32
seq1349 89.7 9e-13
seq1204 84.2 4e-11
seq477 84.2 4e-11
>seq81
Length=187384
Score = 154 bits (170), Expect = 3e-32
Identities = 167/219 (76%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| || | ||| || |||||||| || |||||||| || |||||||| || |
Sbjct 173393 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 173334
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || || || || || || || || || || ||||||||||||
Sbjct 173333 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCC 173274
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422
||||| || ||||| ||||| ||| ||| |||||||| ||| | || || || | ||
Sbjct 173273 TTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTC-GCTGGGCTCCACCTCAAGAGT 173215
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||| || || || ||||| || || || ||||||||
Sbjct 173214 GATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173176
Score = 154 bits (170), Expect = 3e-32
Identities = 167/219 (76%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| || | ||| || |||||||| || |||||||| || |||||||| || |
Sbjct 173621 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 173562
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || || || || || || || || || || ||||||||||||
Sbjct 173561 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCC 173502
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422
||||| || ||||| ||||| ||| ||| |||||||| ||| | || || || | ||
Sbjct 173501 TTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTC-GCTGGGCTCCACCTCAAGAGT 173443
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||| || || || ||||| || || || ||||||||
Sbjct 173442 GATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173404
Score = 154 bits (170), Expect = 3e-32
Identities = 167/219 (76%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| || | ||| || |||||||| || |||||||| || |||||||| || |
Sbjct 173849 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 173790
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || || || || || || || || || || ||||||||||||
Sbjct 173789 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCC 173730
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422
||||| || ||||| ||||| ||| ||| |||||||| ||| | || || || | ||
Sbjct 173729 TTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTC-GCTGGGCTCCACCTCAAGAGT 173671
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||| || || || ||||| || || || ||||||||
Sbjct 173670 GATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173632
Score = 145 bits (160), Expect = 1e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| || | ||| || |||||||| || |||||||| || |||||||| || |
Sbjct 173165 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 173106
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || || || || || || || || || || ||||||||||||
Sbjct 173105 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCC 173046
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| ||||| || ||| |||||||| | || || || | |||
Sbjct 173045 TTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTG 172986
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || || ||||| || || || ||||||||
Sbjct 172985 ATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 172948
>seq1349
Length=1030505
Score = 89.7 bits (98), Expect = 9e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317
||| || ||| |||| || |||||||| || || ||||| || || || | | |||
Sbjct 331254 GTGGAGGGTGAACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGTGGCCGTCCTGCAGCTG 331313
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| || || || ||||| | || || || || || || || ||||| || || |||||
Sbjct 331314 CTTGCCAGCAAAGATGAGACGCTGCTGATCAGGAGGGATCCCCTCCTTATCATGGATCTT 331373
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437
|||||| | | ||| |||| | ||| || | || ||||||| || | ||
Sbjct 331374 GACCTTGATATTCACAATGCTGTCATTGGGTTCCACATGCAGACTGATGGTCTTGTCAGT 331433
Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461
|||||||| || |||||||||||
Sbjct 331434 CAGGGTCTTCACAAATATCTGCAT 331457
Score = 89.7 bits (98), Expect = 9e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317
||| || ||||||| | |||||||| || |||||| | | |||||| || | |||
Sbjct 331482 GTGGAGGGTGGACTTCATCTGGATGTTGTAGGTGGAGAGGGCGCACCCATCCTCAAGCTG 331541
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| || || | || || | || || || || || || || ||||| || || |||||
Sbjct 331542 CTTACCAGCATAGATCAGACACTGCTGATCAGGAGGGATCCCCTCCTTATCATGGATCTT 331601
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437
|||||| | | ||| |||| | ||| || | || ||||||| || || ||
Sbjct 331602 GACCTTGATATTCACAATGCTGTCATTGGGTTCCACATTCAGACTGATGGTCTTGCCAGT 331661
Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461
|||||||| || |||||||||||
Sbjct 331662 CAGGGTCTTCACAAATATCTGCAT 331685
>seq1204
Length=196151
Score = 84.2 bits (92), Expect = 4e-11
Identities = 83/105 (79%), Gaps = 2/105 (2%)
Strand=Plus/Plus
Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTC 68416
|||||||| || || |||||||||||||| ||||| ||||| ||| | || || ||
Sbjct 162795 CCTTCCTTATCCTGGATCTTTGCCTTGACATTTTCGATCGTGTC-GCTGGGCTCCACCTC 162853
Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| ||||||||| |||||||| | ||||| ||||| ||||||||
Sbjct 162854 GAGGGTGATGGTCTTTCCCGTCAACGTCTTCACGAAGATCTGCAT 162898
>seq477
Length=589179
Score = 84.2 bits (92), Expect = 4e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 84442 TGGGTGACGAGAGCGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGG 84501
||| | ||| | ||||||| |||||||||||| ||||| ||||||||||||| ||
Sbjct 240398 TGGATTACGTCATCGCCCGGCTAGCTCAGTCGGTAGAGCTTGAGGCTCTTAACCTCAGGG 240457
Query 84502 TCGTGGGTTCGAGCCCCACATCGGGC 84527
|||| |||||||||||||| | ||||
Sbjct 240458 TCGTTGGTTCGAGCCCCACGTTGGGC 240483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921226885747040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |