Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq81 154 3e-32 seq1349 89.7 9e-13 seq1204 84.2 4e-11 seq477 84.2 4e-11 >seq81 Length=187384 Score = 154 bits (170), Expect = 3e-32 Identities = 167/219 (76%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || |||| || | ||| || |||||||| || |||||||| || |||||||| || | Sbjct 173393 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 173334 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || || || || || || || || || || |||||||||||| Sbjct 173333 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCC 173274 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422 ||||| || ||||| ||||| ||| ||| |||||||| ||| | || || || | || Sbjct 173273 TTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTC-GCTGGGCTCCACCTCAAGAGT 173215 Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| || || || ||||| || || || |||||||| Sbjct 173214 GATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173176 Score = 154 bits (170), Expect = 3e-32 Identities = 167/219 (76%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || |||| || | ||| || |||||||| || |||||||| || |||||||| || | Sbjct 173621 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 173562 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || || || || || || || || || || |||||||||||| Sbjct 173561 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCC 173502 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422 ||||| || ||||| ||||| ||| ||| |||||||| ||| | || || || | || Sbjct 173501 TTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTC-GCTGGGCTCCACCTCAAGAGT 173443 Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| || || || ||||| || || || |||||||| Sbjct 173442 GATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173404 Score = 154 bits (170), Expect = 3e-32 Identities = 167/219 (76%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || |||| || | ||| || |||||||| || |||||||| || |||||||| || | Sbjct 173849 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 173790 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || || || || || || || || || || |||||||||||| Sbjct 173789 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCC 173730 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422 ||||| || ||||| ||||| ||| ||| |||||||| ||| | || || || | || Sbjct 173729 TTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTC-GCTGGGCTCCACCTCAAGAGT 173671 Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| || || || ||||| || || || |||||||| Sbjct 173670 GATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173632 Score = 145 bits (160), Expect = 1e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || |||| || | ||| || |||||||| || |||||||| || |||||||| || | Sbjct 173165 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 173106 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || || || || || || || || || || |||||||||||| Sbjct 173105 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCC 173046 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || ||||| ||||| || ||| |||||||| | || || || | ||| Sbjct 173045 TTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTG 172986 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || || ||||| || || || |||||||| Sbjct 172985 ATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 172948 >seq1349 Length=1030505 Score = 89.7 bits (98), Expect = 9e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || ||| |||| || |||||||| || || ||||| || || || | | ||| Sbjct 331254 GTGGAGGGTGAACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGTGGCCGTCCTGCAGCTG 331313 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || || || ||||| | || || || || || || || ||||| || || ||||| Sbjct 331314 CTTGCCAGCAAAGATGAGACGCTGCTGATCAGGAGGGATCCCCTCCTTATCATGGATCTT 331373 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 |||||| | | ||| |||| | ||| || | || ||||||| || | || Sbjct 331374 GACCTTGATATTCACAATGCTGTCATTGGGTTCCACATGCAGACTGATGGTCTTGTCAGT 331433 Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461 |||||||| || ||||||||||| Sbjct 331434 CAGGGTCTTCACAAATATCTGCAT 331457 Score = 89.7 bits (98), Expect = 9e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || ||||||| | |||||||| || |||||| | | |||||| || | ||| Sbjct 331482 GTGGAGGGTGGACTTCATCTGGATGTTGTAGGTGGAGAGGGCGCACCCATCCTCAAGCTG 331541 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || || | || || | || || || || || || || ||||| || || ||||| Sbjct 331542 CTTACCAGCATAGATCAGACACTGCTGATCAGGAGGGATCCCCTCCTTATCATGGATCTT 331601 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 |||||| | | ||| |||| | ||| || | || ||||||| || || || Sbjct 331602 GACCTTGATATTCACAATGCTGTCATTGGGTTCCACATTCAGACTGATGGTCTTGCCAGT 331661 Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461 |||||||| || ||||||||||| Sbjct 331662 CAGGGTCTTCACAAATATCTGCAT 331685 >seq1204 Length=196151 Score = 84.2 bits (92), Expect = 4e-11 Identities = 83/105 (79%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTC 68416 |||||||| || || |||||||||||||| ||||| ||||| ||| | || || || Sbjct 162795 CCTTCCTTATCCTGGATCTTTGCCTTGACATTTTCGATCGTGTC-GCTGGGCTCCACCTC 162853 Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||| |||||||| | ||||| ||||| |||||||| Sbjct 162854 GAGGGTGATGGTCTTTCCCGTCAACGTCTTCACGAAGATCTGCAT 162898 >seq477 Length=589179 Score = 84.2 bits (92), Expect = 4e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 84442 TGGGTGACGAGAGCGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGG 84501 ||| | ||| | ||||||| |||||||||||| ||||| ||||||||||||| || Sbjct 240398 TGGATTACGTCATCGCCCGGCTAGCTCAGTCGGTAGAGCTTGAGGCTCTTAACCTCAGGG 240457 Query 84502 TCGTGGGTTCGAGCCCCACATCGGGC 84527 |||| |||||||||||||| | |||| Sbjct 240458 TCGTTGGTTCGAGCCCCACGTTGGGC 240483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921226885747040