Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq81 102 9e-17
seq738 96.9 4e-15
seq29872 89.7 6e-13
seq19796 87.8 2e-12
seq2275 86.0 7e-12
seq23301 84.2 2e-11
seq2887 82.4 8e-11
>seq81
Length=187384
Score = 102 bits (112), Expect = 9e-17
Identities = 166/238 (70%), Gaps = 1/238 (0%)
Strand=Plus/Minus
Query 41972 AATT-TATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATAT 42030
|||| ||| |||| || || | ||||| || | || | ||| |||||| || || |
Sbjct 173869 AATTCTATTGACCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGT 173810
Query 42031 TGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCT 42090
|||| || | || || || | || || |||||||| ||||| || || || | |||||
Sbjct 173809 TGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCT 173750
Query 42091 GGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGC 42150
| || | || | || ||||||||| ||| || || | || | | |||||||
Sbjct 173749 GATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGC 173690
Query 42151 TCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| | ||||| || | |||||||| ||||| || || || ||||||||||| |||||
Sbjct 173689 TGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173632
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || | || || || | || || |||||||| ||||| ||
Sbjct 173367 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 173308
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || | |||||| || | || | || ||||||||| ||| || || | |
Sbjct 173307 GATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 173248
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | | |||||||| | ||||| || | |||||||| ||||| || || || |||||
Sbjct 173247 CTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTAC 173188
Query 42197 AAAGATTTGCAT 42208
|||||| |||||
Sbjct 173187 AAAGATCTGCAT 173176
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || | || || || | || || |||||||| ||||| ||
Sbjct 173595 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 173536
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || | |||||| || | || | || ||||||||| ||| || || | |
Sbjct 173535 GATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 173476
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | | |||||||| | ||||| || | |||||||| ||||| || || || |||||
Sbjct 173475 CTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTAC 173416
Query 42197 AAAGATTTGCAT 42208
|||||| |||||
Sbjct 173415 AAAGATCTGCAT 173404
Score = 93.3 bits (102), Expect = 5e-14
Identities = 138/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || | || || || | || || |||||||| ||||| ||
Sbjct 173139 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 173080
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || | |||||| || | || | || ||||||||| ||| || || | |
Sbjct 173079 GATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATT 173020
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | | ||||| || | ||||| || | |||||||| ||||| || || || |||||
Sbjct 173019 CTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTAC 172960
Query 42197 AAAGATTTGCATTTTC 42212
|||||| ||||| |||
Sbjct 172959 AAAGATCTGCATGTTC 172944
>seq738
Length=1186676
Score = 96.9 bits (106), Expect = 4e-15
Identities = 74/87 (85%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 56994 TATGAAAAATTT--TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGG 57051
|||||||| | | ||||| || | | |||||||||| |||||||||||||||||||||
Sbjct 39044 TATGAAAATTCTGGTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGG 39103
Query 57052 ACATACTCACCACTATACTACCGAGGA 57078
|||||||||||||||||| ||||||
Sbjct 39104 GGATACTCACCACTATACTAACGAGGA 39130
>seq29872
Length=509
Score = 89.7 bits (98), Expect = 6e-13
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| || |||| || | | |||||||||| ||||| |||||||||||||||| ||||
Sbjct 415 AAAAACTTACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATAC 474
Query 57058 TCACCACTATACTACCGAGGAT 57079
| ||||||||||| |||||||
Sbjct 475 TGTCCACTATACTAACGAGGAT 496
>seq19796
Length=866
Score = 87.8 bits (96), Expect = 2e-12
Identities = 68/81 (84%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
|||||| |||| || | | |||||||||||||||| |||||||||||||||| ||||
Sbjct 559 AAAAATAAACTCCCCGTCGGGGAATCGAACCCTGGTCTTCCGCGTGACAGGCGGAGATAC 618
Query 57058 TCACCACTATACTACCGAGGA 57078
| ||||||||||| ||||||
Sbjct 619 TGTCCACTATACTAACGAGGA 639
>seq2275
Length=43787
Score = 86.0 bits (94), Expect = 7e-12
Identities = 69/82 (84%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 56998 AAAAATTTT-CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
||| ||||| |||| || | | |||||||||| ||||| |||||||||||||||| |||
Sbjct 23771 AAACATTTTACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATA 23712
Query 57057 CTCACCACTATACTACCGAGGA 57078
|| ||||||||||| ||||||
Sbjct 23711 CTGTCCACTATACTAACGAGGA 23690
>seq23301
Length=1685
Score = 84.2 bits (92), Expect = 2e-11
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078
|||||||||||||||| |||||||||||||||| ||||| ||||||||||| ||||||
Sbjct 6 AATCGAACCCTGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTATACTAACGAGGA 64
>seq2887
Length=65953
Score = 82.4 bits (90), Expect = 8e-11
Identities = 66/80 (83%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058
|||| | |||| || | | |||||||||| ||||| |||||||||||||||| |||||
Sbjct 55202 AAAAGTGACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACT 55143
Query 57059 CACCACTATACTACCGAGGA 57078
||||||||||| ||||||
Sbjct 55142 GTCCACTATACTAACGAGGA 55123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542979680226880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |