Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq854 141 9e-29 seq681 86.0 6e-12 >seq854 Length=240782 Score = 141 bits (156), Expect = 9e-29 Identities = 429/656 (65%), Gaps = 10/656 (2%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| ||| ||| | ||| ||||| |||||| ||| ||||| | ||||| | |||| Sbjct 76157 TACAATTTCTTCGGCTTTAAAACCCTGGAGCGGTCCTACCTGTTGAAGATCAACGGCAAA 76098 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCA-CGGCCACGA 93836 || ||||||||||||| || |||| ||| | || | | ||||| || | || || Sbjct 76097 GTGGCCGAGCGACCGCAGCACATGCTCATGAGGGTTTCTGTGGGGATCCATCAAACA-GA 76039 Query 93837 CAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGG---GACAAGAGGTATACCATGG 93892 || | | | ||| || || || ||| | || ||| ||| ||| | Sbjct 76038 TATTGATGCAGCGATTGAAACCTA-CA---ACCTGCTGTCAGAGAAGTGGTTCACCCATG 75983 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 || ||||||| || || || || || ||| ||||||| |||| || |||||| Sbjct 75982 CCTCCCCGACACTCTTTAATGCAGGTACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGC 75923 Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 | | | |||| ||| |||| || |||| |||| || || | || ||| || Sbjct 75922 TCGCCATGAAGGATGACAGCATCGAGGGCATTTATGACACGCTGAAACAGTGCGCGCTCA 75863 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||| || | || || |||||||| | ||| | | | | | | ||| | Sbjct 75862 TCTCCAAGTCGGCTGGAGGAATCGGTGTGGCCGTCAGCTGCATCAGATCTACGGGAAGTT 75803 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 ||||| || |||||||||| |||||| || || ||||| ||||| | || | ||||| Sbjct 75802 ACATCGCTGGCACCAATGGCAACTCCAATGGGCTTGTCCCCATGCTGAGAGTTTACAACA 75743 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || ||||| |||||||||||||| | |||| || ||||||| | || | Sbjct 75742 ACACCGCACGCTATGTGGACCAGGGTGGAAACAAGAGGCCTGGGGCTTTCGCCATGTACC 75683 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | || |||||||| | || | | ||| | || || |||||| || || | Sbjct 75682 TGGAACCCTGGCATTCCGATATATTTGACTTCCTGGAGTTGAAGAAGAACACTGGAAAAG 75623 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | | |||| ||||||||||| ||||||||| | ||| | || ||| | || ||| | Sbjct 75622 AGGAGCAGAGAGCCAGAGACCTTTTCTACGCTATGTGGATCCCTGACTTGTTCATGGAGA 75563 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368 | || |||| ||| | |||| ||| | ||||| | ||||||||||| ||| Sbjct 75562 GGGTGGAGAGTAACCAGGACTGGTCTCTAATGTGTCCAGACGAATGTCCCGGGCTG 75507 Score = 118 bits (130), Expect = 1e-21 Identities = 179/252 (71%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 94994 AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAG 95053 ||||||| |||||| |||| | |||| || |||| | | |||| |||||| ||| Sbjct 74892 AGGGCATCCTTCAGTACGACATGTGGGAGAAGACGCCCACCGACCTGTTGGACTGG-AAG 74834 Query 95054 CT-CTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATG 95112 || ||| | | | ||| ||||| |||| ||| ||||| | ||||| ||| Sbjct 74833 CTGCTAAAGGAAAAAATCGCCAAGCACGGCGTGAGGAACAGTCTGCTCTTAGCCCCGATG 74774 Query 95113 CCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCC 95172 ||||| ||||| || || |||||||| |||||||||||||| ||||| ||| |||| | Sbjct 74773 CCCACCGCCTCAACCGCCCAGATCCTGGGCAACAACGAGTCTATCGAAGCCTACACCAGC 74714 Query 95173 AACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTA 95232 ||| | |||| | | |||| || ||||||| |||| | ||||| |||||||| Sbjct 74713 AACATCTACACCCGCAGGGTCCTGTCCGGGGAGTTCCAGATTGTCAACCCTCACCTCCTC 74654 Query 95233 CGGGACCTGACG 95244 ||||||||| Sbjct 74653 AAAGACCTGACG 74642 >seq681 Length=269650 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 94180 TTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAG 94239 || || || || || ||||| ||||| | || ||| || ||| | || ||| |||| Sbjct 109999 TTTGCTGTGTACCTGGAGCCGTGGCATTCCGATGTGTTTGCGTTCCTGGAGCTGAAAAAG 110058 Query 94240 AACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGAC 94299 ||| ||||| || | ||||||||||||| || |||| |||| | ||| | |||||| Sbjct 110059 AACACTGGCAAAGAGGAGCAGAGGGCCAGAGATCTGTTCTTCGCTTTGTGGATCCCAGAC 110118 Query 94300 CTTTTTATGAAACGCGTCGA 94319 || ||||||||||| || || Sbjct 110119 CTCTTTATGAAACGAGTGGA 110138 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 95072 TCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGC 95131 ||| ||| || || | ||| ||||| |||| ||||||||||| |||||||| || | Sbjct 111359 TCAGACATGGCGTCAGGAACAGCCTGCTGCTGGCTCCCATGCCCACAGCCTCCACCGCCC 111418 Query 95132 AGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACA 95182 ||||||| || ||||||||||| |||| ||| |||| |||| | |||| Sbjct 111419 AGATCCTGGGGAACAACGAGTCCATCGAGGCCTACACCAGCAACATCTACA 111469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494510889538720