Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq854 116 4e-21 seq81 93.3 4e-14 >seq854 Length=240782 Score = 116 bits (128), Expect = 4e-21 Identities = 767/1226 (63%), Gaps = 50/1226 (4%) Strand=Plus/Plus Query 153333 TAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCGTACGGC 153392 ||||| ||||| ||| ||| || | || |||| ||||| ||| ||| |||| Sbjct 74974 TAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCTTTCGAACGGG 75033 Query 153393 ATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATGC 153452 |||| || | || |||||||||| |||||||| ||||| || || || | || Sbjct 75034 TAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGCCTGTGG 75093 Query 153453 TTCTCGTTG-----CTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAATTT 153507 || |||| || || ||| || | ||||||| ||| ||| || || | Sbjct 75094 CGCTTGTTGGACTTCTCAGCTTCGGGCACT-----GGATAGTAATTAATATCTATGATCT 75148 Query 153508 TGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTCA 153567 |||| | ||| || || || || || | || ||||| | || ||| | ||| Sbjct 75149 TGTTCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAAGTCC 75208 Query 153568 TTTCGTCGACG-CGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGGCCGTC 153626 || || | ||||| | || | || | || ||||||||||| || || | Sbjct 75209 GCTCAGCGGTGACGTACATGTTGAGT----GCGACGGAGGCCAGATTACAAACNGCTACC 75264 Query 153627 TCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCC 153686 || ||| | | |||| | ||| || || | ||| || ||||||| || ||| |||| Sbjct 75265 TCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCC 75324 Query 153687 AAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCG 153746 | ||| ||||| ||||| || | |||||| || |||||| |||||||||| || |||| Sbjct 75325 AGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCG 75384 Query 153747 GTCTCGACTTGCGTTTCGACGAT--------AAACCTATGCAGGTCCTGCGCTCGCACCC 153798 || || || | || | ||| ||||| ||| || ||| | | ||| | Sbjct 75385 GTTTCAGTCTGGGACTCTATGATGGCATGCCAAACC--TGCTGGGCCTTCAC---CACAC 75439 Query 153799 GCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGT 153858 ||| || |||||| || |||||||| ||| || ||||||||| || || Sbjct 75440 GCT--TGA-CGCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCCCCCC 75496 Query 153859 AGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGT 153918 |||| ||| || |||||||| | | |||||||| || ||||| | || | Sbjct 75497 AGCACTCGTTCAGCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCT 75556 Query 153919 TGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGC--GCGCCTT 153976 || | |||||||| || || | ||| | ||||| | ||||| | || | | Sbjct 75557 CCACCCTCTCCATGAACAAGTCAGGGATCCACATAGCGTAGAAAAGGTCTCTGGCTCTCT 75616 Query 153977 GCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGGCGTGCCA 154036 || ||||| || |||| |||| | || | | | | || |||| ||||| Sbjct 75617 GC--TCCTCTTTTCCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCA 75674 Query 154037 GGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGACGTGGCG 154093 |||||| | ||| | ||| | || || | | ||||| ||||| || || | ||| Sbjct 75675 GGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCG 75734 Query 154094 CACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGTCGA 154153 | | |||||| | || | || |||||| | || || | | | |||| ||||| Sbjct 75735 TGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCC 75794 Query 154154 ATTGATCTTGCTGCCGCGGGCGCGCACTTGATGC-----ACGTTAACGCCAATGCCGCC- 154207 | ||| | || || || | |||||| ||| || || || || || Sbjct 75795 AGCGATGTAACTTCC-----CGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCA 75849 Query 154208 GCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATC 154267 |||| |||| || ||| ||||| | |||||| || ||||| |||||||| || Sbjct 75850 GCCG-ACTTGGAGATGAGCGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTC 75908 Query 154268 GTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAA 154327 || | | |||||| ||| || ||| || || || || || || ||| Sbjct 75909 ATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAAA 75968 Query 154328 GAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGC 154387 ||| || || || || || ||| || | || || | ||| ||||| || || Sbjct 75969 GAGTGTCGGGGAGGCATGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTTTCAATCGC 76028 Query 154388 GTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACG 154447 | || ||||| || || || | | || | |||||||||||||||||| || Sbjct 76029 TGCATCAATATCTGTTTGATGGATCCCCACAGAAACCCTCATGAGCATGTGCTGCGGTCG 76088 Query 154448 TTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAACCGAA 154507 ||||| ||| | || |||||||| || || || |||||||| | ||||| Sbjct 76089 CTCGGCCACTTTGCCGTTGATCTTCAACAGGTAGGACCGCTCCAGGGTTTTAAAGCCGAA 76148 Query 154508 ATACTTGTATTCAAAATCTAGCTCAT 154533 | ||||| |||||| | |||| Sbjct 76149 GAAATTGTACGAAAAATCGCGGTCAT 76174 >seq81 Length=187384 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || | || ||||| || | || | | | |||||||| || |||||||||||| Sbjct 173403 GCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 173344 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || || || || || | | |||| || | ||| || || || || Sbjct 173343 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 173284 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | | || | ||||||| | | |||||| Sbjct 173283 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCAC 173224 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || |||||||| ||||||||||| ||||||||| Sbjct 173223 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 173175 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || | || ||||| || | || | | | |||||||| || |||||||||||| Sbjct 173631 GCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 173572 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || || || || || | | |||| || | ||| || || || || Sbjct 173571 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 173512 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | | || | ||||||| | | |||||| Sbjct 173511 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCAC 173452 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || |||||||| ||||||||||| ||||||||| Sbjct 173451 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 173403 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || | || ||||| || | || | | | |||||||| || |||||||||||| Sbjct 173858 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 173799 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || || || || || | | |||| || | ||| || || || || Sbjct 173798 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 173739 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || || | | || | ||||||| | | ||||||| Sbjct 173738 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 173679 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | || || |||||||| ||||||||||| ||||||||| Sbjct 173678 TCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 173631 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || | || ||||| || | || | | | |||||||| || |||||||||||| Sbjct 173175 GCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 173116 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || || || || || | | |||| || | ||| || || || || Sbjct 173115 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 173056 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | | || | |||||| | | |||||| Sbjct 173055 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCAC 172996 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || |||||||| ||||||||||| ||||||||| Sbjct 172995 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 172947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496049428991040