Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq854 100 3e-16
seq81 100 3e-16
seq681 91.5 1e-13
>seq854
Length=240782
Score = 100 bits (110), Expect = 3e-16
Identities = 127/175 (73%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 146615 CGTTGACGCACTTGTTGACGGCGATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGT 146674
|| ||||| || |||||| |||| ||||||| ||||| || || |||||| ||
Sbjct 75215 CGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACNGCTACCTCGTCGCTGC 75274
Query 146675 CGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAttttttt 146734
| || | |||||| || | ||| || ||||||| ||||||| |||||| ||| | |
Sbjct 75275 TGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCT 75334
Query 146735 GGTTACTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTC 146789
|||| || | | ||||||| || |||||||||||||| || ||||||||
Sbjct 75335 GGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTC 75389
>seq81
Length=187384
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| | ||||| ||| || ||||| || |||
Sbjct 173144 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 173085
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | ||||||||| || || ||||| ||||||||| ||| || |||
Sbjct 173084 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 173025
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || || | || | || ||||| ||||| |||
Sbjct 173024 ACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTT 172965
Query 127097 TTTACAAAAATCTGCATG 127114
|||||||| |||||||||
Sbjct 172964 TTTACAAAGATCTGCATG 172947
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| | ||||| ||| || ||||| || |||
Sbjct 173372 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 173313
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | ||||||||| || || ||||| ||||||||| ||| || |||
Sbjct 173312 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 173253
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || || | || | || ||||| ||||| |||
Sbjct 173252 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTT 173193
Query 127097 TTTACAAAAATCTGCATG 127114
|||||||| |||||||||
Sbjct 173192 TTTACAAAGATCTGCATG 173175
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| | ||||| ||| || ||||| || |||
Sbjct 173600 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 173541
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | ||||||||| || || ||||| ||||||||| ||| || |||
Sbjct 173540 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 173481
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || || | || | || ||||| ||||| |||
Sbjct 173480 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTT 173421
Query 127097 TTTACAAAAATCTGCATG 127114
|||||||| |||||||||
Sbjct 173420 TTTACAAAGATCTGCATG 173403
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| | ||||| ||| || ||||| || |||
Sbjct 173828 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 173769
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | ||||||||| || || ||||| ||||||||| ||| || |||
Sbjct 173768 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 173709
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || || | || | || ||||| ||||| |||
Sbjct 173708 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTT 173649
Query 127097 TTTACAAAAATCTGCATG 127114
|||||||| |||||||||
Sbjct 173648 TTTACAAAGATCTGCATG 173631
>seq681
Length=269650
Score = 91.5 bits (100), Expect = 1e-13
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 146680 TACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTA 146739
|||| |||||||| | ||| || |||||| | |||||| |||||| || | |||||
Sbjct 110553 TACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGTTG 110494
Query 146740 CTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTC 146789
|| | ||||||||| |||||||||||||||||| ||| ||||||||
Sbjct 110493 CTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCGGTTTC 110444
Score = 82.4 bits (90), Expect = 7e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 146071 ACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAAC 146130
||||||||||| || | |||||| | | | || | |||||||||| | | |||||
Sbjct 111500 ACCTGAAACTCTCCCGAGAGAACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGATG 111441
Query 146131 GACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAAA 146190
||||||||||| || || ||||| || || | || || |||||| |||| |||||
Sbjct 111440 GACTCGTTGTTCCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATGGGAGCCAGCAGCAGG 111381
Query 146191 GAGTTTCTCACGCCGTGTCT 146210
||| || ||||| |||||
Sbjct 111380 CTGTTCCTGACGCCATGTCT 111361
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475296738831680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |