Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq854 95.1 1e-14 seq681 95.1 1e-14 >seq854 Length=240782 Score = 95.1 bits (104), Expect = 1e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665 |||||||| || || ||||||||||||||||| |||||||| ||||| | ||| ||| Sbjct 75389 GAAACCGGCACTCCATACATGCTCTACAAAGATGCCTGCAATAGGAAGAGCAACCAGCAG 75330 Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCC 123725 || |||| || || || | || ||||| ||| | |||||| | ||||||| | | Sbjct 75329 AATCTGGGCACCATCAAGAGCAGCAATCTATGCACAGAAATTGTGGAATACACCAGCAGC 75270 Query 123726 GATCAAGTGGCCGTGTGTAATTTGGCTTC 123754 || | || || || |||||| |||| || Sbjct 75269 GACGAGGTAGCNGTTTGTAATCTGGCCTC 75241 >seq681 Length=269650 Score = 95.1 bits (104), Expect = 1e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647 || ||||| | ||| |||||||| || || |||||||||||||| |||||||||||| Sbjct 110426 ATCATCGAGTCTCAAACAGAAACCGGCACACCATACATGCTCTACAAGGACGCCTGCAAC 110485 Query 123648 AGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATT 123707 ||||| | ||| ||| ||| |||| || || |||| || ||||| ||| | || ||| Sbjct 110486 AGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATCCAGCAATCTGTGCACAGAGATT 110545 Query 123708 ATCGAATACA 123717 | || |||| Sbjct 110546 GTAGAGTACA 110555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451809222826720