Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq854 167 3e-36 seq681 95.1 1e-14 seq1534 84.2 3e-11 >seq854 Length=240782 Score = 167 bits (184), Expect = 3e-36 Identities = 621/960 (65%), Gaps = 24/960 (3%) Strand=Plus/Plus Query 116239 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 116298 || ||| | || || | ||| |||||||||| || ||||| | || | | | || ||| Sbjct 75046 ATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGAC 75105 Query 116299 TTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 116358 || ||| ||| ||||| |||| |||| || | | | || | |||||| Sbjct 75106 TTCTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACA 75165 Query 116359 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACA 116418 || ||||| || | || || |||| | |||||| | || ||| | |||| Sbjct 75166 ACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAAGTCCG---CTCAGCGGTGACG 75222 Query 116419 TACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTAC 116478 ||| | || |||| || ||||||||||| || | ||| || | ||||| Sbjct 75223 TACATGTTGAGTGCGACGGAGGCCAGATTACAAACNGCTACCTCGTCGCTGCTGGTGTAT 75282 Query 116479 TCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGAC 116538 || | |||||| || || | ||| ||||| |||||||||| |||| || || | Sbjct 75283 TCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTC 75342 Query 116539 TTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTG 116598 || | || || ||||| ||||||||||| ||||| || || || || || ||||||| Sbjct 75343 TTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCT 75402 Query 116599 AGAATAGCCTTCCATACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTC 116657 | || || | ||| || | | | | || || || ||| | || || || | ||| Sbjct 75403 ATGATGGCATGCCAAACCTGCTGGGCCTTCACCACACGC-TTGACGCGGCCTTCTTTCTC 75461 Query 116658 GTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCTGGTGCCT 116716 ||| || |||||||| ||||||||| || ||| |||| ||| ||||| || | Sbjct 75462 GTATTTGGTGTAGAGCTTCTCAAACTCCTC-CCCCCAGCACTCGTTCAGCCCGGGACATT 75520 Query 116717 TATCTGGACAGAAGAGAGACCA---TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGT 116773 |||||||| | |||||||| || || |||| |||| || |||||| | || Sbjct 75521 CGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCC---ACCCTCTCCATGAACAAGT 75577 Query 116774 CTGGGATCCAGAGCGCCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTG 116832 | |||||||| | || |||| || || | | | ||| || | || || || Sbjct 75578 CAGGGATCCACATAGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTG-TTC 75636 Query 116833 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 116892 |||||||| ||||| | ||||| | ||||| ||||||||||||| |||| Sbjct 75637 TTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAA 75696 Query 116893 GACCCCTTGCGAC----GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCG 116948 | |||| || | ||| |||||| ||||| | || || ||| | || | Sbjct 75697 G-CCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCT 75755 Query 116949 AAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTT--GTTG 117006 ||||| || | | |||| || | |||||| || || || | |||| | Sbjct 75756 CAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGAT--GTAACTTCCCGTA 75813 Query 117007 GCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCAC 117066 | ||||| | || | || ||| || || || ||| |||| ||||| | |||||| Sbjct 75814 GATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGACTTGGAGATGAGCGCGCAC 75873 Query 117067 TCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAG 117126 | | || || | || || || ||||| |||| |||| | |||| ||||||||| Sbjct 75874 TGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAG 75933 Query 117127 CTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 117186 || |||| |||||||| ||||| || || ||||| || || | || ||| ||||| Sbjct 75934 CTGGACAGCTGTGGCCTGTTGGTACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTGAAC 75993 >seq681 Length=269650 Score = 95.1 bits (104), Expect = 1e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 ||||||||| | ||||| | ||| | | |||| ||||| |||| ||| ||||| |||||| Sbjct 111467 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTCCCCAGGATCTGGGCGGTGGAG 111408 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 |||||||||||||| |||| || |||||||| Sbjct 111407 GCTGTGGGCATGGGAGCCAGCAGCAGGCTGTT 111376 Score = 86.0 bits (94), Expect = 8e-12 Identities = 113/155 (73%), Gaps = 4/155 (3%) Strand=Plus/Minus Query 116460 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATT--TGAACTCTTAATGGTG 116517 |||||| || |||||||||| ||| || || |||| ||| || | | | |||||| Sbjct 110569 CTCATCTTTGCTCGTGTACTCTACAATCTCTGTGCACAGATTGCTGGATT--TGATGGTG 110512 Query 116518 CCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTC 116577 |||| ||||| || || ||| |||| || || |||||||||||||| ||||| || Sbjct 110511 CCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTG 110452 Query 116578 CCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612 || || || ||||| |||| || || || | ||| Sbjct 110451 CCGGTTTCTGTTTGAGACTCGATGATGGCGTACCA 110417 >seq1534 Length=15379 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598 ||||||| | | |||||| || || |||||| ||| || ||||| || |||| |||| Sbjct 8667 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCCCTTTTCT 8726 Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 127647 ||| |||||| || | | ||| || ||||||||||| || |||||||| Sbjct 8727 TCAGCCAGAAGATGGAAGCAAAGGACCCAGAGAAGAAAATACCCTCCAC 8775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613243913385120