Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq854 152 8e-32 seq681 93.3 7e-14 >seq854 Length=240782 Score = 152 bits (168), Expect = 8e-32 Identities = 366/546 (67%), Gaps = 6/546 (1%) Strand=Plus/Plus Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTA-CACGTCCATCAGCCCTGGAC 205118 ||||||||| ||||| ||| | |||| || || | ||| || ||||||| |||| Sbjct 75459 CTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCAC-TCGTTCAGCCCGGGAC 75517 Query 205119 ATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGGT 205178 ||| | |||||||| |||||||| ||| | | |||||||||||| |||| || Sbjct 75518 ATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTCCATGAACAAGT 75577 Query 205179 CGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCT 205238 | |||||||| |||| || || || | ||| || | || | |||| ||||| Sbjct 75578 CAGGGATCCACATAGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTGTTCT 75637 Query 205239 TTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297 | ||||| ||||| ||| | | || |||| ||||| || || | ||| ||| | Sbjct 75638 TCTTCAACTCCAG-GAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAA 75696 Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGC 205357 || || ||||||||||| |||||||||||||| ||| | | |||| |||||| | Sbjct 75697 GCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTC 75756 Query 205358 AGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCC 205417 ||||| || || || || |||| | | || || |||| |||| || || Sbjct 75757 AGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACTTCCCGTAGAT 75816 Query 205418 CTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCACTCT 205477 || | | | || |||| | || || || |||| |||||| ||| | ||||||| | Sbjct 75817 CTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGACTTGGAGATGAGCGCGCACTGT 75876 Query 205478 TGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACGAA 205537 | ||| ||| || ||||| ||||| || ||| || | | ||| |||| Sbjct 75877 TTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTG 75936 Query 205538 GCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAGCG 205596 | ||||| |||| |||||| || || | ||||| || ||| ||| ||| |||| | Sbjct 75937 GACAGCTGTGGC-CTGTTGGTACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTGAACCA 75995 Query 205597 CTTCTC 205602 |||||| Sbjct 75996 CTTCTC 76001 Score = 120 bits (132), Expect = 5e-22 Identities = 115/145 (79%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 203917 CCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTT 203976 ||| ||||| | ||||||| | ||||||| |||||| || || ||||| ||||| Sbjct 74317 CCAGCCGTAGAAGTGCATGCTGGTTAGTTTGCCATAGTTGGGCTCTGCGATGTGGATGTT 74376 Query 203977 CAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGGTCT 204035 |||||||||||| ||||||||| |||||||| || || || ||||| ||||| ||||| | Sbjct 74377 CAGAGACTGGCTCTGGTCGATG-AAGGCGCCGCGGTCGGCTGCCATCTTGATGATGGTTT 74435 Query 204036 TCTGCGAAATCTCCCACACCGTCTT 204060 |||| || || |||||||| || || Sbjct 74436 TCTGGGAGATTTCCCACACAGTTTT 74460 Score = 113 bits (124), Expect = 7e-20 Identities = 181/260 (70%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 204179 AGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTG 204238 ||||| ||||||| ||||| || || |||||||| |||| |||||| | | |||| || Sbjct 74658 AGGTGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTG 74717 Query 204239 GTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATG 204298 ||| | | ||||| | |||||||||||| | ||||| ||||| ||| |||||||| Sbjct 74718 GTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATC 74777 Query 204299 GGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTC 204358 || || | |||||| ||| | ||| |||| || || | ||| || || Sbjct 74778 GGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTC 74837 Query 204359 CAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTG 204418 ||||| || | |||| || ||||||||||| |||||| |||||| | ||| Sbjct 74838 CAGTCCAACAGGTCGGTGGGCGTCTTCTCCCACATGTCGTACTGAAGGATGCCCTTGCTG 74897 Query 204419 ACTGGGCTGCCCTTGTACGT 204438 || ||| ||| | ||| || Sbjct 74898 ACCGGGGAGCCTTCGTAGGT 74917 >seq681 Length=269650 Score = 93.3 bits (102), Expect = 7e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 204193 GATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAA 204252 || |||||| ||||| || || |||| || ||| | | |||| ||||| | | |||| Sbjct 111501 GACCTGAAACTCTCCCGAGAGAACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGAT 111442 Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312 | ||||||||| || | ||||| |||||| ||| ||||||||||||||||| ||||| Sbjct 111441 GGACTCGTTGTTCCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATGGGAGCCAGCAGCAG 111382 Query 204313 G 204313 | Sbjct 111381 G 111381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794813959145920