Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30]
34,332 sequences; 378,032,400 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq854 152 8e-32
seq681 93.3 7e-14
>seq854
Length=240782
Score = 152 bits (168), Expect = 8e-32
Identities = 366/546 (67%), Gaps = 6/546 (1%)
Strand=Plus/Plus
Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTA-CACGTCCATCAGCCCTGGAC 205118
||||||||| ||||| ||| | |||| || || | ||| || ||||||| ||||
Sbjct 75459 CTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCAC-TCGTTCAGCCCGGGAC 75517
Query 205119 ATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGGT 205178
||| | |||||||| |||||||| ||| | | |||||||||||| |||| ||
Sbjct 75518 ATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTCCATGAACAAGT 75577
Query 205179 CGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCT 205238
| |||||||| |||| || || || | ||| || | || | |||| |||||
Sbjct 75578 CAGGGATCCACATAGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTGTTCT 75637
Query 205239 TTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297
| ||||| ||||| ||| | | || |||| ||||| || || | ||| ||| |
Sbjct 75638 TCTTCAACTCCAG-GAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAA 75696
Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGC 205357
|| || ||||||||||| |||||||||||||| ||| | | |||| |||||| |
Sbjct 75697 GCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTC 75756
Query 205358 AGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCC 205417
||||| || || || || |||| | | || || |||| |||| || ||
Sbjct 75757 AGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACTTCCCGTAGAT 75816
Query 205418 CTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCACTCT 205477
|| | | | || |||| | || || || |||| |||||| ||| | ||||||| |
Sbjct 75817 CTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGACTTGGAGATGAGCGCGCACTGT 75876
Query 205478 TGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACGAA 205537
| ||| ||| || ||||| ||||| || ||| || | | ||| ||||
Sbjct 75877 TTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTG 75936
Query 205538 GCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAGCG 205596
| ||||| |||| |||||| || || | ||||| || ||| ||| ||| |||| |
Sbjct 75937 GACAGCTGTGGC-CTGTTGGTACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTGAACCA 75995
Query 205597 CTTCTC 205602
||||||
Sbjct 75996 CTTCTC 76001
Score = 120 bits (132), Expect = 5e-22
Identities = 115/145 (79%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 203917 CCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTT 203976
||| ||||| | ||||||| | ||||||| |||||| || || ||||| |||||
Sbjct 74317 CCAGCCGTAGAAGTGCATGCTGGTTAGTTTGCCATAGTTGGGCTCTGCGATGTGGATGTT 74376
Query 203977 CAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGGTCT 204035
|||||||||||| ||||||||| |||||||| || || || ||||| ||||| ||||| |
Sbjct 74377 CAGAGACTGGCTCTGGTCGATG-AAGGCGCCGCGGTCGGCTGCCATCTTGATGATGGTTT 74435
Query 204036 TCTGCGAAATCTCCCACACCGTCTT 204060
|||| || || |||||||| || ||
Sbjct 74436 TCTGGGAGATTTCCCACACAGTTTT 74460
Score = 113 bits (124), Expect = 7e-20
Identities = 181/260 (70%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 204179 AGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTG 204238
||||| ||||||| ||||| || || |||||||| |||| |||||| | | |||| ||
Sbjct 74658 AGGTGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTG 74717
Query 204239 GTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATG 204298
||| | | ||||| | |||||||||||| | ||||| ||||| ||| ||||||||
Sbjct 74718 GTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATC 74777
Query 204299 GGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTC 204358
|| || | |||||| ||| | ||| |||| || || | ||| || ||
Sbjct 74778 GGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTC 74837
Query 204359 CAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTG 204418
||||| || | |||| || ||||||||||| |||||| |||||| | |||
Sbjct 74838 CAGTCCAACAGGTCGGTGGGCGTCTTCTCCCACATGTCGTACTGAAGGATGCCCTTGCTG 74897
Query 204419 ACTGGGCTGCCCTTGTACGT 204438
|| ||| ||| | ||| ||
Sbjct 74898 ACCGGGGAGCCTTCGTAGGT 74917
>seq681
Length=269650
Score = 93.3 bits (102), Expect = 7e-14
Identities = 93/121 (77%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 204193 GATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAA 204252
|| |||||| ||||| || || |||| || ||| | | |||| ||||| | | ||||
Sbjct 111501 GACCTGAAACTCTCCCGAGAGAACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGAT 111442
Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312
| ||||||||| || | ||||| |||||| ||| ||||||||||||||||| |||||
Sbjct 111441 GGACTCGTTGTTCCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATGGGAGCCAGCAGCAG 111382
Query 204313 G 204313
|
Sbjct 111381 G 111381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 794813959145920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |