Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq81 131 4e-25 seq1349 91.5 3e-13 >seq81 Length=187384 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 173388 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 173329 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || || ||||| || | |||||| || || ||| ||||| || Sbjct 173328 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 173269 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||||| || | |||||| | | || || || | ||||| || Sbjct 173268 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGT 173209 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || ||||| ||||| || || Sbjct 173208 CTTGCCAGTCAGGGTTTTTACAAAGATCTG 173179 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 173616 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 173557 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || || ||||| || | |||||| || || ||| ||||| || Sbjct 173556 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 173497 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||||| || | |||||| | | || || || | ||||| || Sbjct 173496 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGT 173437 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || ||||| ||||| || || Sbjct 173436 CTTGCCAGTCAGGGTTTTTACAAAGATCTG 173407 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 173844 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 173785 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || || ||||| || | |||||| || || ||| ||||| || Sbjct 173784 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 173725 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||||| || | |||||| | | || || || | ||||| || Sbjct 173724 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGT 173665 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || ||||| ||||| || || Sbjct 173664 CTTGCCAGTCAGGGTTTTTACAAAGATCTG 173635 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 173160 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 173101 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || || ||||| || | |||||| || || ||| ||||| || Sbjct 173100 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 173041 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| |||||| || | |||||| | | || || || | ||||| || Sbjct 173040 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGT 172981 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || ||||| ||||| || || Sbjct 172980 CTTGCCAGTCAGGGTTTTTACAAAGATCTG 172951 >seq1349 Length=1030505 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||||||||| || ||||||| |||| ||||||||||| | || || || Sbjct 331246 AGCACAAGGTGGAGGGTGAACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGTGGCCGTCC 331305 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 | ||||||||| || || ||||||||||||||||| || ||| || || || || Sbjct 331306 TGCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGATCAGGAGGGATCCCCTCCTTATCA 331365 Query 199538 TGAATCTTTTGCTTCACGGATT--CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCG 199595 || ||||| ||| | ||| | | | |||| | | ||| |||| || |||| | Sbjct 331366 TGGATCTTGACCTTGA--TATTCACAATGCTGTCATTGGGTTCCACATGCAGACTGATGG 331423 Query 199596 TCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||| | || || || |||||||| || || Sbjct 331424 TCTTGTCAGTCAGGGTCTTCACAAATATCTG 331454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178403017440244