Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq81 134 2e-26 seq1349 96.9 4e-15 >seq81 Length=187384 Score = 134 bits (148), Expect = 2e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | ||||| || || || | || |||||| ||||| |||||||||| Sbjct 173404 TGCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 173345 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| | |||||| || | | Sbjct 173344 AGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGG 173285 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||||||||| |||||| ||| | || | | |||||||| | |||| Sbjct 173284 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCA 173225 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | |||||||| ||||| ||||| ||||| |||||||| ||||| Sbjct 173224 CCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173176 Score = 134 bits (148), Expect = 2e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | ||||| || || || | || |||||| ||||| |||||||||| Sbjct 173632 TGCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 173573 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| | |||||| || | | Sbjct 173572 AGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGG 173513 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||||||||| |||||| ||| | || | | |||||||| | |||| Sbjct 173512 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCA 173453 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | |||||||| ||||| ||||| ||||| |||||||| ||||| Sbjct 173452 CCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173404 Score = 132 bits (146), Expect = 5e-26 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420 |||| || || || | ||||| || || || | || |||||| ||||| |||||| Sbjct 173864 TATTGACCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAG 173805 Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480 ||||| || ||||| | || || ||||||||||| || || |||| | |||||| || Sbjct 173804 TCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCA 173745 Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT 46540 | || | || ||||||||| |||||| ||| | || | | |||||||| | Sbjct 173744 GGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGC 173685 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || | |||||||| ||||| ||||| ||||| |||||||| ||||| Sbjct 173684 TCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 173632 Score = 131 bits (144), Expect = 2e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | ||||| || || || | || |||||| ||||| |||||||||| Sbjct 173176 TGCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 173117 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| | |||||| || | | Sbjct 173116 AGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGG 173057 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||||||||| |||||| ||| | || | | ||||| || | |||| Sbjct 173056 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCA 172997 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 | || | |||||||| ||||| ||||| ||||| |||||||| ||||| || Sbjct 172996 CCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATGTT 172945 >seq1349 Length=1030505 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 46376 AAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGC 46435 ||||| | ||| || || | || |||||| ||||| |||||||| || || ||| | Sbjct 331240 AAACGGAGCACAAGGTGGAGGGTGAACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGTGG 331299 Query 46436 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCC 46495 |||| | ||||||||||| || || || | |||||||| || | || | | |||| Sbjct 331300 CCGTCCTGCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGATCAGGAGGGATCCCCTCC 331359 Query 46496 TTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTG 46555 || || |||||| ||||| || | | |||| | | |||||||| || || Sbjct 331360 TTATCATGGATCTTGACCTTGATATTCACAATGCTGTCATTGGGTTCCACATGCAGACTG 331419 Query 46556 ATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| ||| | ||||| || || ||||| || ||||| Sbjct 331420 ATGGTCTTGTCAGTCAGGGTCTTCACAAATATCTGCAT 331457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564995827940640